UFO05796.5prime Sequence
1068 bp (961 high quality bases) assembled on 2010-12-10
> UFO05796.5prime
CAGTCGACATGAGTCTTAATTACGAACAAAACGCGGCAGACGAGCAGTTC
GCCCGCGCACACAAAGCAGTCAGCCTGTCGGACGACGAGGAGAGCGAGGG
CCAAGCGGAGACCACGTCTGCACCAAATCAGGAGCCGCATGTTAGTAAAT
CACCGAGGGAGTACTACGATGAGCCTGGCGGGAAGGGCAATGGAAGTGGA
GCAGATGATCAGGATGAGCCGGAAACGGAGGCTGCCAGCGGAGCGGCCAA
CACACATGTGGTGGCACACCACTACAACGAGCTGAAGGAGGCGGGCCGCA
AGGATCGTCAGAAGTCAAAGATATTCTTCATGAGGAACTTTAACAACTGG
ATCAAGAGCCAGCTGATCAACGAGTATATGTCGCAGATTAAGCAGAACAA
ACGCATGGGTGATGCTCTCAGAGTTCTGGACATGTGCTGCGGCAAGGGCG
GTGACCTTCTCAAATGGGAGAAGGCTGCCATCTCCCACCTCATCTGCACC
GACATCGCTGAGGTGTCGGTGGAGCAGTGCCAGCGGCGATATCAGGACAT
CCTGCAGCGATCGGAGAAGTCGAAATTTGCGAATAAGTTTACCGCGGAGT
TTTTTGCCTGCGACTCCACATTAGTGCGCCTGCGGGAACGGTATAAGGAT
CCTTCGCTTCAGCTGAATCTCGTGTCCTGTCAGTTTGCCTTTCACTATTG
CTTCGAGTCAATGGCGCAGGCAGATTGCATGATGCGGAATGCAGCCGAGT
GTCTGAAACCCGGTGGCTTCTTCATAGCCACAATGCCGGATGCCTACGAG
ATCATCCGCAGGCTAACGGCAGCCGGTCCAGATGCCCGGCGTTTCGGTAA
CGATGTGTACAGCATTGAATTTGACTGCGAAACGGATCCTTTGCGCTTTT
CGAGCCAAGTATCAGTTTCACTTGGAGGGCGTTGTCGATTGCCCCGAGTT
CTAGTGCATTTTCCCACGCTGTCAGCTGGGCCAGAAAAATACGTCTGCAG
CTATGATCGCCTCCAATTGCGAATAACTACAGAATCTGCACCCACGCGCA
CTCTTCTCGCAGCGAGTT
UFO05796.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:19:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)35Bd-RA | 1769 | CG3688-RA | 80..1079 | 9..1004 | 4795 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:19:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15010018..15010983 | 9..971 | 4665 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:19:17 has no hits.
UFO05796.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:34 Download gff for
UFO05796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Bd-RA | 70..1089 | 1..1015 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:27:20 Download gff for
UFO05796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Bd-RA | 72..1091 | 1..1015 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:15 Download gff for
UFO05796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Bd-RA | 72..1091 | 1..1015 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:15 Download gff for
UFO05796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15010010..15010983 | 1..971 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:27:20 Download gff for
UFO05796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15010010..15010983 | 1..971 | 99 | == | Plus |
