UFO05801.5prime Sequence
1079 bp (984 high quality bases) assembled on 2009-07-20
> UFO05801.5prime
CAGTCGACATGTATCCGGTGGCGTTTGTCTTGCTGCTGCTGGTTGCACCT
AATGCCGACGCGAATTTGGGACGCGATGACGAACGATTCCACGAGGAGCT
AGTGGTTCGTCCATTGTCCGGCGACCATGTCAACACCTACTTTCAGTTCA
CCACGCGCTGGCACTACGGCGAAAAGGATAATCTTTACCACACCCAATTG
ACGCCTCGAGTAATTGCGGAGCTGTTGCAGCAGTTTGCGGTAAAGGAGCT
GCACATTGGCCTAACCCAGGGACTGTGGCGCTACGAGACATGGGGCTATC
CCATTGTGGAGGCCACCAGCGGTGCCGAGATGTGGGCGTGGTTCAGTGGC
GCAAATTTGACCAACCGGGATGTGGATCGCCAGTGGAAGGAGTTGGCCAA
CGTTTTCTCGGGCGTGTTGTGCGCCTCGTTGAATTTCGTCGACAATACGA
ATAGCATTGCACCGAGGCACTTGATTCGTCCACAATTTATGCCAGCCAAT
GGCCAAAGATTCGTTCGCTATGCCACATTGCCGCGTGAGATCGTGTGCAC
GGAGAATCTGACGCCGTGGAAGAAACTACTGCCATGCGGTAGTGCCTCAG
GCTTTGCCTCACTTCTCAACTCGGGACATGTACACAACACCAAATACCAT
TCGCTGGGCCTGAAGGTGCGCGTGCTCTGCGAGGATCACGATGAGGACAA
TTGCATTGTGGAGCTGACGCAGACGGCCAACTTGGTCTACGATCTCCGTC
TGTTCGAATTGAGCAACAATGATTTCTCGCTGCGCCGCCTGTTCGGCATG
GGACTGAATGGCTATTGTGAGCTGGCCGAGAGCTCCAAGATCTATGTGCA
GCGCACGAGCTGGCGAGCGCTATCAGCTGTCCAGACCCGTGCACGAGTGA
GACACTCGTGGTGGGCATAGTGTCGTCTATTCGTCTACGATATGCACGAG
CAGTCAAGAGCGGCGACGCTGTTATGTCGCTGCTGCGCGAGGCGCAATCG
TCGTCCATTGCAGCATCTGCCCGGACGTCATCGTATCTATGGACGCAGGA
CGTGCAGATCGTACGAGGTGAGATCGCAC
UFO05801.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11190-RA | 2521 | CG11190-RA | 294..1249 | 8..954 | 4565 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8405807..8406586 | 954..184 | 3490 | 98.6 | Minus |
| X | 23542271 | X | 8406795..8406970 | 183..8 | 880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:14:59 has no hits.
UFO05801.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:33:28 Download gff for
UFO05801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11190-RA | 314..1282 | 1..964 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:27 Download gff for
UFO05801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11190-RA | 291..1259 | 1..964 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:35 Download gff for
UFO05801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11190-RA | 291..1259 | 1..964 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:35 Download gff for
UFO05801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8405797..8406586 | 184..964 | 98 | <- | Minus |
| X | 8406795..8406973 | 1..183 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:27 Download gff for
UFO05801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8299830..8300619 | 184..964 | 98 | <- | Minus |
| arm_X | 8300828..8301006 | 1..183 | 97 | | Minus |
