UFO05802.5prime Sequence
1085 bp (959 high quality bases) assembled on 2009-07-20
> UFO05802.5prime
CAGTCGACATGAGCGAATCTCTATCTTCTCAAGTGGAGGAGACCAAAGTG
TCCGATGATGATGGTGTAAAAGAGAAAGCTGAAGTGTCCACCGCCAAAGA
TTCGGCGGAAACGGCTATGGAAGTGGAGGCAGATGACACTGGTGGTCAGC
AGCCGGAGCAGAGTGAATTGTTGGATAAGGAGAAATCTGCCACGGTGGAT
ATAAACACACTCACTCCCTCGACGCCCTCACAAACCCCGCCACAACTGCT
GGCCGTCGAAACTGCCACATCGGGAAGCACGGCCGTCATTCCGGAGAACA
TCCTGTCCCCGCCCAAGTCAGAAACTCAAACCGATGAGACTAACACGGCA
ACATCGACGTCCTGCTCCCCAGCCTCTGACGGTCAGCGGTCGCCGGCGGC
GGATCAACAGTCATCGGCACCACCGCCACAGGTACAGGCACAGGCCACGC
CGGCGCCGGTCAATGGCTCCGTACCAAAGTCGGGGAAACCACTCTCCACA
GCGCTCAGCGGCAAGAAGACCAGCAAAGCGGCCACTACGTCACCACGTGC
ATCCAGATGCCGCAAAACCAAGGCGCTGCCCATGTACGAAAGCGAAATCA
GCGACAACAAGATGGGTATCCGACTGTGCATCAAGAGATCTGATGCCGGA
GAAGGCGCACCTGCTGGTGTCACATCTCCGCCAGTTGCAGTTCCCGCAGC
AACAAAAACTGTGCGCAAGCGCGTCCGTAAACCAAAGCAACAGGACAGCG
ATGAGGCCGAGTATGAGCCGCGCAAGAAAAAAGGCGGAGGAGGTGGTAGT
GGCGGCGAAAAGAAGTTTCAACGAGTCCGGATGCTGCGGAGGCGGCTGGC
GATCCAGTCGAGCAGAGTGTCTGGGCTCAAAAGCTGCCCGAGGAAGTCCT
ATTCAGATCTTTGAGCATGCTGGGATACACAGGCTGTCTGCCCACCCTGT
TTCGCCTTGGCAGAGTTTGCTCGCTCTGGCGGCAGGTGTCCTCTTAGCCT
ACTCTGTGCGCACTATGATCTACCACATTGGTCAAGAGAAAATATCGCAC
CGGACTCCAGGCTCATGGTTGTCGACACCGCCTGC
UFO05802.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbl6-RA | 3700 | CG13213-RA | 722..1799 | 9..1077 | 4980 | 98.2 | Plus |
| Fbl6-RB | 3375 | CG13213-RB | 397..1474 | 9..1077 | 4980 | 98.2 | Plus |
| Fbl6-RC | 3098 | CG13213-RC | 120..1197 | 9..1077 | 4980 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11287645..11288544 | 907..9 | 4435 | 99.8 | Minus |
| 2R | 25286936 | 2R | 11287431..11287589 | 1057..904 | 380 | 89.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:16:35 has no hits.
UFO05802.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:33:29 Download gff for
UFO05802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13213-RA | 693..1767 | 1..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:27 Download gff for
UFO05802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl6-RC | 115..1189 | 1..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:22 Download gff for
UFO05802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbl6-RC | 115..1189 | 1..1070 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:22 Download gff for
UFO05802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11287645..11288548 | 1..907 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:27 Download gff for
UFO05802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7175150..7176053 | 1..907 | 99 | | Minus |
