UFO05807.5prime Sequence
1104 bp (999 high quality bases) assembled on 2009-07-20
> UFO05807.5prime
CAGTCGACATGAACGACCTCAAGCCAGCTACAAGTTATAGGAGCACCTCG
CTCCACGACGCCGTCAAGCTGCGCCTGGATGAGCCATCATCCTTTTCACA
GACAGTCCCGCCACAGACGATTCCAGAATTCTTCAAGGAATCGTGCGAGA
AGTATTCGGATCTGCCCGCCTTGGTGTGGGAAACCCCAGGATCTGGGAAC
GATGGTTGGACCACTCTTACGTTTGGCGAGTACCAGGAGCGCGTGGAGCA
AGCGGCGCTGATGCTGCTGAGCGTGGGAGTCGAGGAACGCAGTTCGGTGG
GCATTCTGGCCTTCAATTGTCCCGAGTGGTTCTTCGCGGAATTTGGTGCT
TTGAGAGCTGGAGCTGTTGTAGCCGGAGTTTATCCGAGCAATTCGGCTGA
GGCCGTTCATCACGTCCTAGCCACAGGAGAGTCATCCGTTTGCGTAGTGG
ACGACGCCCAGCAGATGGCCAAGCTGAGGGCCATCAAGGAACGCCTGCCA
CGTCTTAAGGCTGTAATCCAGTTGCACGGACCATTTGAAGCCTTTGTCGA
TCACGAGCCCGGTTACTTTAGCTGGCAGAAACTCCAGGAGCAGACCTTCT
CCAGCGAGCTGAAAGAGGAACTGCTGGCCCGTGAGAGCCGGATTCGTGCC
AACGAGTGTGCCATGCTGATCTTCACCTCGGGCACAGTGGGTATGCCAAA
GGCAGTGATGCTATCCCACGACAACCTCGTGTTCGACACAAAGTCCGCAG
CCGCACACATGCAAGATATCCAAGTTGGCAAGGAGAGTTTTGTGAGCTAC
CTTCCGCTGAGCCATGTGGCTGCCCAGATTTTCGATGTGTTCCTGGGTCT
TTCCCATGCCCGGATGCGTCACATTTGCCGACAAGGACGCACTGAAGGAA
CGCTGATCAAGACCTTTCGCAAGGCGAGGCCAACGAAAATGTTCGGCGTT
CCGCGCGTCTCGAGAACTCAAGAGCGTCTGGTGGCGCGGAGGCCAAGCGA
GACCTACTTCAGAATACTTCTAGCAGAGCTAGAGCTGCTGTCGCTGAACA
CAACACGCTGAATGGGGGGGGGAAGTCCCCATCGAATTAGCACGCTTAAA
ATTG
UFO05807.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4500-RA | 2206 | CG4500-RA | 31..1119 | 8..1089 | 5050 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14027031..14028081 | 8..1051 | 4800 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:15:17 has no hits.
UFO05807.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:33:35 Download gff for
UFO05807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4500-RA | 15..1123 | 1..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:33 Download gff for
UFO05807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4500-RA | 24..1132 | 1..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:49 Download gff for
UFO05807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4500-RA | 24..1132 | 1..1100 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:49 Download gff for
UFO05807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14027024..14028105 | 1..1071 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:33 Download gff for
UFO05807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14027024..14028105 | 1..1071 | 97 | -> | Plus |
