UFO05818.5prime Sequence
1126 bp (1005 high quality bases) assembled on 2009-07-20
> UFO05818.5prime
CAGTCGACATGGCATCCGTACGCACCATGAACGACTATCACAAGCGCATC
GAGGCGGCCGACGACAAGCTAATCGTGCTGGATTTCTATGCGACATGGTG
TGGTCCCTGCAAGGAAATGGAGAGCACCGTCAAATCGCTGGCCAGAAAAT
ACTCCAGCAAGGCGGTGGTGCTCAAGATCGATGTGGACAAATTCGAGGAG
CTGACGGAGCGCTACAAGGTGCGCAGCATGCCAACGTTTGTCTTTTTGCG
CCAAAATCGACGCTTGGCCTCCTTTGCCGGCGCCGACGAGCACAAGCTGA
CCAACATGATGGCCAAGCTGGTGAAGGCGGCAAGCTTTCTAGACCATTCG
TTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAA
TCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGAT
TCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCC
AGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGA
GCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGT
AATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATG
AACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATT
TGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTT
AAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACAT
ATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACG
CCACATCTTGCGAATATATGTGTAGAAACTGCCGGAATCGTCGTGTATTC
ACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAAC
AAGGGTGAACACTATCCCATATCACCAGCTTCACCGTCTTTCATTGCCAT
ACGAATTCCGGATGAGCATCATCAGCGGCAGAATGGTGAATAAGCCGGAT
AACCTGTGCTATTTTTGTTTACGTCTTTAAAGCGTATAATCCACTGACGA
CTGTTAGTAATGACACTGACTGAATG
UFO05818.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dhd-RB | 952 | CG4193-RB | 290..610 | 9..329 | 1605 | 100 | Plus |
| dhd-RA | 772 | CG4193-RA | 107..427 | 9..329 | 1605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5312460..5312780 | 9..329 | 1605 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:49:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 214..299 | 880..963 | 127 | 64 | Plus |
UFO05818.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:33:42 Download gff for
UFO05818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-RA | 81..413 | 1..335 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:47 Download gff for
UFO05818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-RA | 100..432 | 1..335 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:31 Download gff for
UFO05818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-RA | 100..432 | 1..335 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:31 Download gff for
UFO05818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5312453..5312780 | 1..329 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:47 Download gff for
UFO05818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5206486..5206813 | 1..329 | 98 | == | Plus |
