UFO05822.5prime Sequence
1075 bp (976 high quality bases) assembled on 2009-07-20
> UFO05822.5prime
CAGTCGACATGTCGGGCACATCGCAGAAACACAGGAACTTCGTTGCGGAG
CCAATGGGCAACAAGTCGGTGACGGAACTGGCCGGAATTGGGGAAACCCT
CGGTGGACGCTTGAAGGACGCTGGATTCGATATGGCCTACACCGTTTTGG
GACAGTATCTGGTGCTGAAAAAGGACGAGGAGCTGTTCAAGGACTGGATG
AAGGAGGTGTGCCACGCCAGCTCCAAACAGGCATCCGATTGCTACAACTG
TCTCAACGATTGGTGCGAGGAGTTCTTGGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTT
GCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTA
AATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATA
TTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACAC
CACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATT
CACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAA
CAAGGTGAACACTATCCCATATCACCAGCTCACGTCTTTCATGCATACGA
AATCCGATGAGCATTCATCAGCGGGCAGAATGTGAATAAAGGCGGATAAA
ACTTGTGCTTTTTTCTTTACGTCTTAAAAGGCGTAATATCAGCTGAACGG
CTGGTATAGTAACTGAGCACTGACT
UFO05822.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:00:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| baf-RB | 1022 | CG7380-RB | 145..416 | 7..278 | 1360 | 100 | Plus |
| baf-RA | 607 | CG7380-RA | 145..416 | 7..278 | 1360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:00:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8029815..8029959 | 134..278 | 725 | 100 | Plus |
| 2L | 23513712 | 2L | 8029606..8029734 | 7..135 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:00:27 has no hits.
UFO05822.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:33:37 Download gff for
UFO05822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| baf-RA | 140..418 | 1..283 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:28 Download gff for
UFO05822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| baf-RA | 142..420 | 1..283 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:05 Download gff for
UFO05822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| baf-RA | 142..420 | 1..283 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:05 Download gff for
UFO05822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8029603..8029733 | 1..134 | 97 | -> | Plus |
| 2L | 8029816..8029959 | 135..278 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:28 Download gff for
UFO05822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8029603..8029733 | 1..134 | 97 | -> | Plus |
| arm_2L | 8029816..8029959 | 135..278 | 100 | == | Plus |
