UFO05832.5prime Sequence
1082 bp (976 high quality bases) assembled on 2009-07-20
> UFO05832.5prime
CAGTCGACATGTCCACGGAGGACTTTTACCTACGCTACTACGTCGGACAC
AAGGGCAAGTTCGGGCACGAATTCTTGGAGTTCGAGTTCCGGCCGGATGG
CAAGCTGCGGTACGCCAACAACTCCAACTACAAGAACGACACCATGATCC
GCAAGGAGGCCTTCGTCCACCAGTCCGTGATGGAAGAACTGAAGCGAATC
ATCATCGACTCGGAGATCATGCAGGAGGACGATCTGCCCTGGCCGCCACC
AGATCGCGTGGGTCGACAGGAACTGGAGATCGTCATCGGAGACGAGCACA
TCTCGTTCACCACCTCGAAAACGGGATCATTGGTGGACGTGAACCGGTCA
AAAGATCCCGAGGGCCTGCGATGCTTTTACTACCTGGTGCAGGATCTCAA
GTGCCTGGTCTTCTCACTCATCGGCCTGCATTTCAAGATCAAGCCCATAG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCAT
AATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTG
GTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCT
ATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCC
ACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAG
CCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTT
GTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAGTT
GTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGAT
TGGCTGAGACGAAAAACATATTTCTCAATAAACCCTTTAGGAAATAGCCA
GGTTTCACCGTACACGCCACATCTTGCGAATATATGTGTAGAACTGCGGA
AATCGTCGTGTTATTCCCTCGAGCGATGAAACGTTCAGTTGCTCATGGAA
CGGTAACAGGTGAACATATCGATACCAGCTCA
UFO05832.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mago-RA | 1103 | CG9401-RA | 117..558 | 8..449 | 2210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21128693..21128955 | 8..270 | 1315 | 100 | Plus |
| 2R | 25286936 | 2R | 21129010..21129192 | 267..449 | 915 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:29:53 has no hits.
UFO05832.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:33:59 Download gff for
UFO05832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mago-RA | 108..561 | 1..455 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:26:06 Download gff for
UFO05832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mago-RA | 110..563 | 1..455 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:14:16 Download gff for
UFO05832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mago-RA | 110..563 | 1..455 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:14:16 Download gff for
UFO05832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21128686..21128954 | 1..269 | 98 | -> | Plus |
| 2R | 21129013..21129192 | 270..449 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:26:06 Download gff for
UFO05832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17016191..17016459 | 1..269 | 98 | -> | Plus |
| arm_2R | 17016518..17016697 | 270..449 | 100 | == | Plus |
