UFO05835.5prime Sequence
1091 bp (984 high quality bases) assembled on 2009-07-20
> UFO05835.5prime
CAGTCGACATGGTGGAGCTGTCGAGCGTCATTTCCAAGTTCTACAACGAC
TACGTGCAGAATACGCCCAAGAAACTGAAGCTGGTGGACATCTACCTCGG
CTACATTCTGCTCACCGGCATCATCCAGTTTGTTTACTGCTGCCTGGTTG
GAACCTTCCCGTTCAACTCCTTCCTATCTGGTTTCATCAGCACCGTCAGC
TGTTTCGTCCTGGCAGTGTGCCTACGCCTGCAGGCCAATCCCCAGAACAA
GAGCGTGTTTGCCGGCATTTCGCCGGAACGCGGTTTCGCCGACTTCATCT
TCGCTCATGTGATCCTTCATCTGGTGGTCATGAACTTCATCGGTGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGC
GTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAA
CAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCA
TCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATC
ACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGC
CTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCC
ATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGC
TGAGACGAAAAACATATTCTCAATAAACCCTTTAGGAAATAGGCCAGGTT
TTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGA
AATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTGCTCATG
GAAAACGGTGTAACAGGGTGAACACTATCCCATATCACCAGCTCACCGTC
TTTCATTGCATACGAAATTCGGATGACATCATCAGGGGGGCAGATGTGAT
AAGCGATAACTTGTCTATTTCTTACGCCTGAAGGCGTAATC
UFO05835.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)k12914-RA | 526 | CG13393-RA | 126..461 | 9..344 | 1680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8383677..8384012 | 344..9 | 1680 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:49:34 has no hits.
UFO05835.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:33:53 Download gff for
UFO05835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13393-RA | 114..459 | 1..348 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:35 Download gff for
UFO05835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k12914-RA | 119..464 | 1..348 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:13 Download gff for
UFO05835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k12914-RA | 119..464 | 1..348 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:13 Download gff for
UFO05835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8383677..8384018 | 1..344 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:35 Download gff for
UFO05835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8383677..8384018 | 1..344 | 98 | | Minus |
