UFO05845.5prime Sequence
1072 bp (980 high quality bases) assembled on 2009-07-20
> UFO05845.5prime
CAGTCGACATGGGCAGCAACTCCAAGGCAGACCCCATCTCGCTGACCTTC
CACGACTCCTGCCTGCGGATGTCCGACGTCCAGTTGCTCCACGGCCCGCA
CTGGCTGAACGACCAGATCCTGAGCTTCTACTACGAATACCTGGCCCACA
TGAAGTACAAGACCAATGCGGATCTGCACTTCATTGCGCCGGAGATTACG
CAGTGTATGAAGTACATGGGCGACCAGGAGCTGAAGCAGCTTCTCGACCA
GAGCAACACCACTGGCAAGCCCTTTATCTTCTTCGCGCTGAACGACAACG
AAACCACCGATGCTGGTGGCAGCCACTGGTCACTGTTGGTCTTCTCGCGT
CCGGAGAAGACCTTCTATCACTTCGATTCGTATGGGAACAACAACACGGG
CAACTCCCTGGAGCTGATGAACAAGATCAAGGACCTGCTTGGCGTCCGAA
TGGCCAAATTCCGGCCCATGCGCTGCCTACAGCAGGCGAACGGCTACGAC
TGTGGCATCCATGTTATCTGCATGACCGACCACATTGCCGATTACCTAAA
CAGATACGAGGTGATCGACGGACTGCCGTCGCTGCACATCGACACCGTGA
AGGCGAAGCGCACCGAGCTACTGAAACTCATCCTGTCGCTGGGCGGCAAG
GGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGG
ATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCGCCCT
GCACTCATCGCAGTACTGTGTATCATAGCATCTGCGACATGCAGCATCAC
AAACGCATGATGACTGATCGCAGCGCATCAGCACTGTCGCTGGCGTATAA
ATATTGCATGGTGAACGGGGCGAGAGTGTCCAATGCCGGTAATCAAACCT
GTGACCACAGATGCCTGAACGA
UFO05845.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:39:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Den1-RC | 1161 | CG8493-RC | 223..867 | 9..653 | 3225 | 100 | Plus |
| Den1-RA | 1257 | CG8493-RA | 319..963 | 9..653 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12338606..12339250 | 9..653 | 3225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:39:07 has no hits.
UFO05845.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:34:13 Download gff for
UFO05845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8493-RB | 141..785 | 9..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:22 Download gff for
UFO05845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Den1-RA | 319..963 | 9..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:57 Download gff for
UFO05845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Den1-RA | 319..963 | 9..653 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:57 Download gff for
UFO05845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12338606..12339250 | 9..653 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:22 Download gff for
UFO05845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8226111..8226755 | 9..653 | 100 | == | Plus |
