UFO05846.5prime Sequence
1106 bp (994 high quality bases) assembled on 2009-07-20
> UFO05846.5prime
CAGTCGACATGGAGCTGAATATCTTTGACGACTGCTGGGAGCTGGTGCAA
CGATTTCAGCGATTGGTTAATGATGGCGAAAACTGCGAGTTCGAGGTGTT
CTGCCGGTGCTGGCGAGAACTGCAGCTGCAGCACCTCTTCACTGCCCAGA
CGAACCACACAGAGGTGATAGCCACCACACTGGCGGCCCTGCATGTGGCC
AAGCGACTGTCGTGCTCCCGACGCACCACCGGGGACGTTTTCCCGGCATC
TCGCGCTCAAAGGATCGGAGGTTTCTTTCTGCTCTACGTAATCTACTACA
AGCAGCCCACGCACAACTTTATTAAGATCGAGGTCTCACCGCGCACTTGG
CAAGAACTAACAGACTACGCTCTAGATCTGCGCAAGGATAGTCCGGAGCG
GAAGGACACTCATCAGATCGCCTACATGCTGTGGCGCCTGACCCAGGAGC
AGGCCTTCCGCTTCACCGCGCTCGACTATTGCCAGGGGTTGGACAATCTG
GTGGACTACGACCGTGTGGAGACCGTAGCGGGTGCCAAGGAACAGAGGCA
GAGTGCCTTGATGCAGAAGCAACAGCGTGCGAACGGCGTCAGTCTCACAT
ACGAACTGGAGGGTCTGCGAGCACTGGACCAGGCAAGCCAGCCATTGTGT
GAACTGGAAGCGGCATACAATGCCCAAAAGAAGCAATTGGCGGCTGGTCA
TGAGCACGCTTTGCCGCCCTCTCAAATATTCGGCCATTTGCGAGAAGTCT
TTGCCGATATCCAAAGTGTTCTAGGAGCTAGAAAGAGTACTCCAGATGAG
AATTGTACCACAACATCTACAGGCAACCAGTTGGAAGTGCGCCAGAGGTG
CGGAACAAGGCCATGTACGCGTCGAGGAACGGGAGCCGCAAACCAGGCGG
ATGAACTAGAAGTGCAGCTGGAGGTCAACGAGACTTATCAACGCCGCATG
TCCTCGGCCACCGGTTTTTCAGAAGGGAACTTCCAGCAGACGTGCAGCAA
GAGTATGAAAATGATTGGTTACTGACGACAAGGAAATGGGAAGTTGGGGT
GAAGCGAGGAGTCACGGAAGAAAAAAACTCAAGGCTTATTTTGGTATATC
TGGCAG
UFO05846.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pbp45-RA | 1370 | CG9597-RA | 104..1187 | 9..1094 | 5010 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15838412..15839412 | 1008..9 | 4765 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:15:35 has no hits.
UFO05846.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:34:01 Download gff for
UFO05846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbp45-RA | 52..1143 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:39 Download gff for
UFO05846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbp45-RA | 96..1187 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:00 Download gff for
UFO05846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbp45-RA | 96..1187 | 1..1094 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:00 Download gff for
UFO05846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15838334..15839416 | 1..1087 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:39 Download gff for
UFO05846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11664056..11665138 | 1..1087 | 97 | | Minus |
