UFO05849.5prime Sequence
1094 bp (988 high quality bases) assembled on 2009-07-20
> UFO05849.5prime
CAGTCGACATGTCCGGTACAACCGCTACCATCCGCACCCGCAAGTTCATG
ACCAACCGCCTGCTCGCCAGGAAACAGATGGTCTGCGATGTCCTCCACCC
AGGATTGTCGTCCGTGAACAAGACCGAGATCCGCGAGAAGCTCGCCGCCA
TGTACAAGGTCACCCCCGATGTGGTCTTCGCCTTCGGATTCCGCACCAAC
TTCGGTGGCGGCCGCTCCACCGGCTTTGCCCTCATCTACGACACCCTGGA
CTTCGCCAAGAAGTTCGAGCCCAAGTACCGCCTGGCCCGTCACGGCCTCT
TCGAACAGAAGAAGCAGACCCGCAAGCAGCGCAAGGAGCGTCGCAACAGG
ATGAAGAAGGTGCGCGGTACTGCCAAGGCCAAGATCGGCACTGGCAAGAA
GGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTC
ATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCC
TGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCA
ACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGAT
CTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTG
CCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGA
AGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACC
TTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAA
GTTGTCCATATTGGCCCACGTTTAAATCAAAACTGGTGAAACTCACCCAG
GGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATA
GGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAA
CTGCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTCAGTTT
GCTCATGAAACGGTGTAACAAGGTGAAACACATATCCAATCACAGCTCAC
CGTCTTTCATTGCATACGAATCGAATGAAACATCATCAGCGGCA
UFO05849.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS24-RA | 646 | CG3751-RA | 77..469 | 9..401 | 1950 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22640703..22641095 | 401..9 | 1950 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:30:15 has no hits.
UFO05849.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:34:17 Download gff for
UFO05849.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS24-RA | 68..473 | 1..407 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:26:18 Download gff for
UFO05849.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS24-RA | 69..474 | 1..407 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:14:28 Download gff for
UFO05849.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS24-RA | 69..474 | 1..407 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:14:28 Download gff for
UFO05849.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22640703..22641102 | 1..401 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:26:18 Download gff for
UFO05849.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18528208..18528607 | 1..401 | 99 | | Minus |
