UFO05851.5prime Sequence
1128 bp (1024 high quality bases) assembled on 2009-07-20
> UFO05851.5prime
CAGTCGACATGCAGTTCACCATTGCCGTCGCCTTACTTTGCTGCGCAATC
GCTTCTACTTTGGCTTATCCGATGCCCGACGACATGACCATGAAGCCCAC
TCCACCACCGCAGTACCCACTCAATCTTCAGGGAGGCGGCGGTGGCCAGA
GCGGCGATGGTTTTGGCTTTGCAGTCCAGGGTCACCAGAAGGTGTGGACC
AGCGACAATGGACGCCACGAGATTGGACTGAATGGAGGATATGGACAGCA
CTTGGGAGGACCATATGGCAACTCAGAACCGAGCTGGAAAGTGGGAAGCA
CCTACACCTACAGATTTCCGAATTTCGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAT
TCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAAC
CTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGC
CCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAA
TCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATT
CTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCA
CATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCAC
TCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAA
GGTGAACACTATCCCATATCACCAGCTTCACCGTCTTTCATTGCATACGA
ATCCGGATGAGCATCATCAGCGGCAGATGTGAATAAGCGATAAACTTGTG
CTTATTTTTCTTACGTCTTAAAGCCGTATATCCAGCTGAACGACTGTTTA
GTACATGAGCACTGCACTGAATGCTAGT
UFO05851.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpt-RA | 496 | CG12763-RA | 45..362 | 9..326 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18865809..18866126 | 9..326 | 1590 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 21:01:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 412 | 7567 | 412 412 7567bp | 1144..1189 | 999..1044 | 113 | 71.7 | Plus |
UFO05851.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:34:21 Download gff for
UFO05851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dpt-RA | 37..369 | 1..334 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:51:07 Download gff for
UFO05851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dpt-RA | 37..369 | 1..334 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:38:46 Download gff for
UFO05851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dpt-RA | 37..369 | 1..334 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:38:46 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:51:07 has no hits.
