UFO05854.5prime Sequence
264 bp (206 high quality bases) assembled on 2009-07-20
> UFO05854.5prime
CAGTCGACATGGTCCAACGTCTGACGCTCCGGAGACGCCTGTCCTACAAC
ACACGCTCCAACAAGCGGCGCATTGTTCGCACGCCCGGTGGTCGTCTGGT
TTACCAGTATGTGAAGAAGAACCCCACCGTGCCCCGTTGCGGCCAGTGCA
AGGAGAAGTTGACGGGTATCACCCCCTCCCGCCCCAGCGAGCGCCCCGCA
TGTCAAGCGCTGAGACGTGTCAGACTACGTGAGTGCTGTGCACACTGCTG
GGGCGTCTGCGCTC
UFO05854.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:57:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL34b-RD | 622 | CG9354-RD | 48..251 | 9..210 | 955 | 98.5 | Plus |
RpL34b-RC | 589 | CG9354-RC | 15..218 | 9..210 | 955 | 98.5 | Plus |
RpL34b-RA | 771 | CG9354-RA | 197..400 | 9..210 | 955 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:57:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9400755..9400878 | 197..74 | 605 | 99.2 | Minus |
3R | 32079331 | 3R | 9400942..9401006 | 73..9 | 325 | 100 | Minus |
3R | 32079331 | 3R | 26058794..26058917 | 197..74 | 320 | 83.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:57:20 has no hits.
UFO05854.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:31:36 Download gff for
UFO05854.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL34b-RA | 190..414 | 1..221 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:56 Download gff for
UFO05854.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL34b-RA | 190..414 | 1..221 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:49 Download gff for
UFO05854.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL34b-RA | 190..414 | 1..221 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:49 Download gff for
UFO05854.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9400726..9400878 | 74..221 | 96 | <- | Minus |
3R | 9400942..9401013 | 1..73 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:56 Download gff for
UFO05854.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5226448..5226600 | 74..221 | 96 | <- | Minus |
arm_3R | 5226664..5226735 | 1..73 | 95 | | Minus |