UFO05856.5prime Sequence
977 bp (236 high quality bases) assembled on 2009-07-20
> UFO05856.5prime
CAATCCACATGACTTTGCCCGATCTTGTAGCTGGACTTTCGTCAAATCCC
TACTTTGGTGCCGGTTTTGGACTATTTGGTGTGGGCGCCGCTGCTGCCAT
ATTGCCCAAGGGCCTCCAGGGCGGAGTGATACTGTTCCGGCGGCACTGCA
TGATTACCCTGGAGGTGCCGTGTCGGGACAAATCCTATCATTGGCTGTTA
AAATGGATTACGATCAGAGGAGCGCGAAAAACGCAACACTTGAGCGTGGA
GACAAACTTTGTGCAGAACGACAATGGCACAATCAAAACCAGCTATGACT
TCTTACCCAGCATAGGCAAGCATCTGTTCCAGTACAAGGGCAATTGGATT
CAGGTGGAGCGGACCAGGGAACAACAGACATTGGACCTTCACATGGGTGT
TCCTTGGGAGACAGTGACGCTTACAGCGTTTGGTAACAATAAAGGTATAT
ATTTCGATATCCTCGAAAAGGCTAGGCAGCTGGCTCTGGAGGCCACAGAG
GGCAAAACCGTGCTGTACACAGCGATGGGTGCGGAATGGAGACCCTTCGG
ACATCCGCGCAGAAGGCGTCCCACTGGATCGGTGGTGCTGGATCGCGGAA
CTTCTCAACGAATCATTGCCGACTGCCAGGACTTCATTAAGAGCTCTCTG
TGGTATACGCAACGTGGAATCCCCTACCGAAGAGGCTACCTTCTGTACGG
GCCACCTGGTTGTGGCAAGTCTAGCTTTATAACCGCCCTGGCGGGCGAAC
TGGAGTACATTGTCTGCCTGCTAACCTATCCGAAAGAGGCCTCACCGATG
ATCGACTCACTCATCTCCTGAATGGTCGCGCCACATCAGAGTATCGTTCT
GCTGGAGGACATCTACTCAATAGTCGTCTCGCGCGAAGCTACTCCGCACA
AGAAATCCGCCTTTGACGGTCTCAACAAGATTAACTTTCCTGCGGTCTAC
TAAATGGCTTGGGACGGCTGTGTGCAT
UFO05856.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:23:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4908-RA | 1353 | CG4908-RA | 52..1003 | 9..962 | 4285 | 96.9 | Plus |
| CG4908-RB | 1710 | CG4908-RB | 409..1360 | 9..962 | 4285 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10223146..10224068 | 9..931 | 4220 | 97.6 | Plus |
Blast to na_te.dros performed 2014-11-28 23:23:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X-element | 4740 | X-element ROXELEMENT 4740bp | 2202..2293 | 524..619 | 129 | 61.5 | Plus |
UFO05856.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:31:35 Download gff for
UFO05856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4908-RA | 44..980 | 1..939 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:42 Download gff for
UFO05856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4908-RB | 401..1338 | 1..939 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:10 Download gff for
UFO05856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4908-RB | 401..1338 | 1..939 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:10 Download gff for
UFO05856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10223138..10224075 | 1..939 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:42 Download gff for
UFO05856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10223138..10224075 | 1..939 | 97 | | Plus |
