UFO05858.5prime Sequence
1067 bp (968 high quality bases) assembled on 2009-07-20
> UFO05858.5prime
CAGTCGACATGTTGGCCAATCTGTTGACCCTAAGCTGCCTTCTGGCCCAA
ATTATCCCTCGGATTTGGGGGCAGTATGCGGCGGTGAACTGCTCAGATCC
CAGGATCGAACTGACATCCTGTGGCCGCTTCAGTACGAACGGGTGCTGTG
CCAAGGGATGTGTGAGGAATGTGCGCGGAAGGTGCGTCCAGGAGGAGTGC
ACCGCATCCTGGAGCGGCTGGCTTCAAAGGCCAGTGACCATGAGCTGCTA
CTTCCACTGGTTCCTGCTGATCTTCGCCGGGCTCATCACGGCCCTCATGC
TGGGCCTGGTGGCCTGCAACGCGGCCTGCGAAATAAGGCGCTACCTTCGC
CAGCGGAGAATCGAGCGATTCAGGCGCTTCAGGGATCTGAGCGGAGTCTC
CATTGGATCCACTCAGTGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCACGATGAACCTGAATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGT
GAAAACGGGGGCGAAGAGTTGTCCATATTGGCCACGTTTAAATCAAACTG
GTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCATAAAC
CCTTTAGGAATAGGCCAGGTTTCACGTACACGCCACATCTGCGAATATAT
GTGTAGAACTGCGAAATCGTGTGTATCACTCCAGAGCGATGAAACGTTTC
AGTGCTCATGAACGGGTACAGGTGACTTCATTCACAGCTCACGTCTCATG
CATCGATCCGGATGACT
UFO05858.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15549-RA | 1112 | CG15549-RA | 50..460 | 9..419 | 2055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30936048..30936458 | 419..9 | 2055 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:15:58 has no hits.
UFO05858.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:34:14 Download gff for
UFO05858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15549-RA | 46..466 | 1..425 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:47 Download gff for
UFO05858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15549-RA | 46..466 | 1..425 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:13 Download gff for
UFO05858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15549-RA | 46..466 | 1..425 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:13 Download gff for
UFO05858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30936048..30936462 | 1..419 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:47 Download gff for
UFO05858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26761770..26762184 | 1..419 | 99 | | Minus |
