UFO05860.5prime Sequence
1069 bp (953 high quality bases) assembled on 2009-07-20
> UFO05860.5prime
CAGTCGACATGCCACGCCCAGAAGCAGGCGACAGCTTTCTGAAGCGCGAG
AAGAACACCCAGGAGGTAGTGGAGAATGTGATCGGCGAGCTGAAGAAGAT
CTATCGGAGCAAGTTGCTGCCGCTGGAGGAGCACTACCAGTTCCACGACT
TTCACTCGCCAAAGCTCGAGGATCCAGACTTCGATGCGAAGCCCATGATC
CTGCTGGTGGGCCAGTACTCCACGGGCAAGACGACCTTCATCCGCTATCT
GCTGGAACGCGACTTTCCGGGCATTAGAATTGGTCCGGAGCCAACGACGG
ACCGCTTCATCGCCGTGATGTACGACGACAAGGAGGGTGTGATACCGGGC
AACGCCCTGGTTGTGGACCCCAAGAAGCAGTTCCGGCCGCTGTCCAAGTA
CGGCAACGCCTTCCTGAATCGCTTCCAATGCAGCAGTGTGGCCTCGCCTG
TGCTGAACGCCATCTCCATCGTAGACACGCCCGGAATTCTCTCCGGCGAA
AAGCAGCGCATCGACAGGGGCTACGACTTCACCGGCGTGCTGGAGTGGTT
CGCGGAGCGCGTGGACCGCATCATCCTGCTGTTCGACGCCCACAAACTGG
ACATCTCCGACGAGTTCCGGCGCTCGATCGAGGCGCTCAAGGGACACGAC
GACAAGATCCGTATTATCCTGAACAAGGCCGACATGATTGATCACCAGCA
GTCAATGCGGGTGTACGGAGCACTGATGTGGTCGCTGGGCAAGGTGCTGC
AGACGCCGGGAGGTGGCTCGTGTCTACATCGGCTCCTTCTGGGACCAGCC
GCTGCGCTTCGACGCCAACCGCCGACTGTTCGAGGACGAGGAACAGGATC
TGTTCAGGGATCTGCAGTCCCTGCCGCGTGCCGCCCGCCCTGCGCAGCTG
ACGATCTGATCAAGCGGGCGCCGCCTTGACCAAGTGCATGCCTTTCATCA
TTGCCGAGCTGCGCAAGCAACATGCCCTCTGTTGTTCGGCAGACGGCAAG
AAGAGACTGATTAGACTCGTAGGTTTACGATCGCATCAGCGCGACACTCA
TTCTCCGGCACTCCGACCT
UFO05860.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Past1-RA | 1866 | CG6148-RA | 192..1240 | 9..1049 | 4575 | 96.7 | Plus |
| Past1-RB | 2679 | CG6148-RB | 287..1311 | 33..1049 | 4455 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12698117..12699063 | 33..982 | 4215 | 97.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:16:50 has no hits.
UFO05860.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:34:16 Download gff for
UFO05860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Past1-RA | 184..1253 | 1..1059 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:38 Download gff for
UFO05860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Past1-RA | 184..1253 | 1..1059 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:32 Download gff for
UFO05860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Past1-RA | 184..1253 | 1..1059 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:32 Download gff for
UFO05860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12698119..12699154 | 35..1059 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:38 Download gff for
UFO05860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8523841..8524876 | 35..1059 | 96 | | Plus |
