UFO05862.5prime Sequence
1086 bp (964 high quality bases) assembled on 2009-07-20
> UFO05862.5prime
CAGTCGACATGGCACTGTTCGAGATGAAGTGGCTGCGCCGCTGGGTGCGG
CGCAACACGAATCCCATACCGGAGCACCGGGCGGAGCTGTGGAAGCGGCG
CCTGAGCATCGGGTACGCCGTTCTGGCCTGGCAGGCATTCGGCCTCGTTT
GCTATATGGTCTACACCGGACGCAACGACTGGGCCAAGTACTACGGCTAC
AAGACGGAGGAGGAGATGGCCCTTTCGCCGGCCCAACAGTTCGCCAAGCA
CCTGAAGGTCGAGGGGACCGGCAAGATCATCAGGTTCTCTGGATTCCACA
AGGTGGAGGAGGTGCCCTTCGACGCCAGCGAGGTGGAGCGGGTCAAGGAG
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGC
CACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAA
GCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCT
TGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAG
TTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGG
ATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGG
CCAGGTTTTCACCGTACACGCACATCTTGCGAATATATGTGTAGAAACTG
CCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAACGTTCAGTTTGCT
CATGGAAACGGTGTAACAAGGGTGACACTATCCCATATCAACAGCTCACG
TCTTTCATGCAACGAATCGGATGACATCATCAGGCGGGCAGATGTGATAA
GCGATAACTTGTGCTTATTTCTTACGCTTAAGCGAA
UFO05862.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13365-RA | 499 | CG13365-RA | 71..412 | 9..350 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 620804..621145 | 350..9 | 1710 | 100 | Minus |
| X | 23542271 | X | 620421..620598 | 350..173 | 680 | 92.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:14:10 has no hits.
UFO05862.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:31:32 Download gff for
UFO05862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13365-RA | 58..410 | 1..357 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:47 Download gff for
UFO05862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13365-RA | 65..417 | 1..357 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:47 Download gff for
UFO05862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13365-RA | 65..417 | 1..357 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:58:47 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:41:47 has no hits.
