UFO05877.5prime Sequence
478 bp (362 high quality bases) assembled on 2009-07-20
> UFO05877.5prime
CAGTCGACATGGCAGATTCCAAGGGTGAAGATCTGGCTACGGCGATCCTG
AAGCGCAAGGACCGTCCCAACCGACTGATTGTGGAAGAGGCGCAGAATGA
CGACAACTCTGTGGTGTCGCTATCGCAGGCGAAGATGGATGAGCTGCAGC
TCTTCCGTGGCGACACCGTGATTCTGAAGGGTAAGCGCCGAAAGGAGACG
GTGTGCATCGTGCTCTCGGACGACACCTGTCCCGACGAGAAGATCCGCAT
GAACCGGGGTGGGGCGCAACAACCTGGGCGTCCATCTTTCAGATGTGGTT
TCCGTGCAGTCCCTGCCCGGACGTCAAAGTACGGCAAACGGGGTGCCCAT
CCTGCCCATCGACGAAAGCCACGGAAGCCCTTTACCGGGCACCCCGTTTC
AGAAATCTTTTTCTGAAGCGCTTAATTTCTTAAAGGCCCATCGGCCCATC
CCCCCTGGGGGAGAAATATTTTTTTGGG
UFO05877.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TER94-RA | 3016 | CG2331-RA | 128..485 | 8..369 | 1635 | 97.5 | Plus |
TER94-RE | 3055 | CG2331-RE | 183..527 | 21..369 | 1555 | 97.1 | Plus |
TER94-RC | 3058 | CG2331-RC | 183..527 | 21..369 | 1555 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9990657..9990896 | 126..369 | 945 | 96.3 | Plus |
2R | 25286936 | 2R | 9990470..9990574 | 25..129 | 525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:05:08 has no hits.
UFO05877.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:31:24 Download gff for
UFO05877.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TER94-RA | 117..500 | 1..388 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:07 Download gff for
UFO05877.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TER94-RA | 119..502 | 1..388 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:09 Download gff for
UFO05877.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TER94-RA | 119..502 | 1..388 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:09 Download gff for
UFO05877.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9990471..9990573 | 26..128 | 100 | -> | Plus |
2R | 9990660..9990913 | 129..388 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:07 Download gff for
UFO05877.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5877976..5878078 | 26..128 | 100 | -> | Plus |
arm_2R | 5878165..5878418 | 129..388 | 94 | | Plus |