UFO05878.5prime Sequence
1076 bp (991 high quality bases) assembled on 2009-07-20
> UFO05878.5prime
CAGTCGACATGGCCGACAGCCCGTTCCCGAGGAGCAGCCGCAGTGGCCTG
CTACGCACGACGCTGAACAGCTCGATGCCGCCGCAAAATCTCTCCCACTC
GCTGCTCATCCTCGAGAAGAGCAACGCGGAGCAGAATGAGCTCTCGCTGA
TGGAGGACACCGGCGATGATCTGGATCGGGGCAAGAGCCGCATGGACGTG
CTCTTCCCGCAGTTCTTCGACGTGCTGCAGGCTCAGGGTAACGGGCAGGA
GGCATTCGAGGTGATCCAATCGCTGACGCAAGTCTGTCGCGGCGTGGTGG
AGCAGCTGGAGCTGGAGATCGATCACGGCATGGGTGGGGAACAGGGCGCG
CGGCAACGCGAGTCTATGCTCACCTGGCTGCGACAGGAGATAAACACGTG
GCGCCTGCTGCACGCCCTCTTCTACGACCGCATCCTGCTGCAGACGGACA
GGCAGGCGGATGATGAGATGCAAGATGGCCCCACGCTCGGCGGCAGCGAG
AAGGAGGTCATACAGCAGTTGTACGCCCTCAATGCGACGCTGCGTGAGTA
CCAGCTGGTGGTGGACTGGCTGGAGGCGTGCTACGACCGGGGGGAGCAAC
AAAACCCACTCCACGCCCACGATCGTATGATGGCGTGGGAGAACACGCTC
TTCCAACTGGAGAACCTGCAGGGCGCCGCCTTTGGCAAGGGCCATAAGAT
CGTAACGCGTCTGGATCCAGATGCTCCCGTACGCGAGAAACGACCGTTGC
ACGCCCTCGACGAGGAGGACAACCTGCGCCTGTCCCGCGCCATTTTCGAA
TTGATACGAGCGGGACGCGTCGACGATGGCCTCAAGTTGTGCAAGCACTT
CGGACAGACGTGGCGGGCGGCGATCCTTGAGGGCTGGCGTCTCCACGAGA
TCCCAACTTCGAGCAGAATGTCTCGGTGCTGCACGAAAAGCTGCCCATCG
AGGGCATCCCAGGAGGATTTCTGGAGCGCTGCGCGTGATGCTGCGATTCC
AGAACTTATGACAGTAAGCGCCCGACGGCGGGGTCTTCTCGGCCCTGGCT
CGCTGAACCTTTGCAACACTGACGAT
UFO05878.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nup107-RA | 2715 | CG6743-RA | 126..1190 | 8..1057 | 4895 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10734986..10735946 | 966..8 | 4705 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:27:00 has no hits.
UFO05878.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:31:23 Download gff for
UFO05878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup107-RA | 104..1119 | 1..1012 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:21 Download gff for
UFO05878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup107-RA | 122..1137 | 1..1012 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:37 Download gff for
UFO05878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup107-RA | 122..1137 | 1..1012 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:37 Download gff for
UFO05878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10734935..10735950 | 1..1012 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:21 Download gff for
UFO05878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10734935..10735950 | 1..1012 | 98 | | Minus |
