UFO05881.5prime Sequence
1060 bp (901 high quality bases) assembled on 2009-07-20
> UFO05881.5prime
CAGTCGACATGGCCCATAACTACCTGCAGCCAGTGCACGATCACTTCGAT
GACGTGGACAGATTCGAGGACGTGGACGACGACCTATTCCTGCAGAACAA
ACGGACGGGAGCAGCCAAGCTTCCGCAGCAGAGGAGCACCAATCCCTTCG
AGATGGATGACGATGACGAAGAGGAGATAACCTCGTCGCCATCAGTGGCC
GCACAGCGACTGGCCTATGCTGAGAAGCGAAGGGCCATTGAGCAGCGAAC
TCTGGACTCTACCAACAAAAGCTTGGGTCTGCTCTACGAAACCCAGGAGG
TGGGTAAGGCGACGGCCGTGGAGCTGGCCAAGCAGCGGGAGCAACTGGAG
AAGACATCACATCAGTTGGACGAGATCAGCTCCACGCTGCGCTTCAGCCA
GCGCCATCTGACTGGTCTGAAGAGTGTCTTCGGCGGCCTCAAGAACTACC
TTTCGGGCAACAGGGACCAACCACCCACCGCGACTGGTTCGCCCACGGGC
AGTCAGTCCTCCCAGGAGGCCAATAGCAACATTAACCAGGGTGCCTGTGG
CGGTGCTAGCCCCTCGGCTCCGCTATCACCAGCGGAGCGCTACGACAATC
ATCCGGTTAGCCAGCTGCGCGGTGATCCCAGCAGCACCTACCAGCCCCAG
CGACAGGCGGCCAATCCCTTCCAGGCCCAGATCGATTCCAATCTGGAGGA
GATGTGCAGCAACCTGTCGGTGCTGAAGATGCTGGCCACCGATCTGGGTG
GCGAAATCTGAATCGCAAAATGAATTGCTGGATAACATGAACTACAAAAT
TGAGGATGTCGACTTGAAGATTCACAAGCAGAACAAGGACATGAGCAAGC
TTCTGAAGAAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGGCGGGCCCA
GGTAGTGGCTCATAATCATAATCAATAATCATATCATATCCACAACTAGC
CTAGAGAATCCTGTCATGACTAGTGCTGATCTCACCATAAAAAACGCCCG
GCGCACGACGTTCTGACATCAGATGAGTTCTGAGTCATACTGATCTATCA
ACGTATTCAA
UFO05881.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snap29-RA | 1212 | CG11173-RA | 118..969 | 9..861 | 4210 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23843726..23844310 | 861..276 | 2850 | 99.5 | Minus |
| 2R | 25286936 | 2R | 23844377..23844646 | 278..9 | 1350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:44:29 has no hits.
UFO05881.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:31:03 Download gff for
UFO05881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| usnp-RA | 72..935 | 1..865 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:56 Download gff for
UFO05881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| usnp-RA | 110..973 | 1..865 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:35 Download gff for
UFO05881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snap29-RA | 110..973 | 1..865 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:35 Download gff for
UFO05881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23843726..23844309 | 277..861 | 99 | <- | Minus |
| 2R | 23844379..23844652 | 1..276 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:56 Download gff for
UFO05881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19731902..19732175 | 1..276 | 98 | | Minus |
| arm_2R | 19731249..19731832 | 277..861 | 99 | <- | Minus |
