UFO05889.5prime Sequence
978 bp (626 high quality bases) assembled on 2009-07-20
> UFO05889.5prime
CCTCAACATGGACGATGCCGATGATCTGCGCATAAACCAGCAGCAGCTTA
TGGACGAGATTTCGGCCCTCTTGCAGAACACAGCGAAGCCAAGCGCCGCC
AACGCACTGCAACTGAATCAGGAGCTCCAGCGCCGGCTCATGCAAGTCCG
GACCAAAATTCTGGACGTGTTACAAGTAGTAAGGGCCCGCTTCTCTCGGA
ACGAGGACATCCTGGTGCGCCGGCTGCGACCTCGTTCCCATTTCGGCCCG
AATTCCCTCAATCTTAGCGGGGCGATCCTGCGGAAGGGCACGTTTCGCTT
CAAGGGCAACCTGTTTTTCCAAGACATCGATGGTCGAAGCTGTCCTAACA
ACGAGGATTACGAGGCGCGGTGCCACACGGAGATGTTTCCCACCGACTTT
GACATGCACTCCAGACATGTATGGACATTGCTAGACAAAAAGAATGTGAT
AATGGGTATAAAACAACAGTTACTGGAGCATAGGGCCCACAGTACGAATG
CGCTGCCCAGCGGAAGCCTGAAGCGCAAGCCAATCGAGGGACACTTAAGT
ACACTGGTAAGTCTGCTGGCAACTGCAGATAGTAGCTTCAGCATCGACTG
CAACCTGATCAGCACCCTGGACTTGCAATATCGGCTCTCACCATATAGCT
GTCGATGCAACGTGGAGGGTCTACGTAACACCCGTATCTCAGGCGAGACG
ATTTGTCACCCGAGGATGACGAAACTTTACCTGGCGGTGGCCCCTGCGAA
CAGGATGCACACCTGGAACTTGATCGCCGCGTCCCTAGACGGACGTTCCT
ACTATCATGCTCCGTACGCTTTCATACACGCGTTACTTCTTCTTGCTTGG
AGCTGACAACCGCCATCGCCTGGAGCGAAGAGGACAACGATTAACTAGGG
CGATCGTTGAATAGGAATACGGCATCGATGTATTAACTGGAATAAATTCC
TGGAATACTTCCCGGAACAGTCCCAATT
UFO05889.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pbp95-RA | 2649 | CG2702-RA | 48..1014 | 8..977 | 3845 | 93.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8013838..8014299 | 8..469 | 2235 | 98.9 | Plus |
| 3R | 32079331 | 3R | 8014408..8014915 | 467..977 | 1335 | 88.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:46:20 has no hits.
UFO05889.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:57 Download gff for
UFO05889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbp95-RA | 7..981 | 1..978 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:31 Download gff for
UFO05889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbp95-RA | 40..1014 | 1..978 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:50 Download gff for
UFO05889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbp95-RA | 40..1014 | 1..978 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:50 Download gff for
UFO05889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8013830..8014299 | 1..469 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:31 Download gff for
UFO05889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3839552..3840021 | 1..469 | 98 | -> | Plus |
