UFO05891.5prime Sequence
1104 bp (1027 high quality bases) assembled on 2009-07-20
> UFO05891.5prime
CAGTCGACATGTTGTTCCGCTCAGCGAAAAGCAAGTTCGACGCCGGCGAC
GTGATGCGTCGAATGAAACGCCTGGCGGAGGGCACGATCTCCTCGTACCG
CCGCTTGTTCCTCCTGCTCCTCTGCGTCTGTGTGGTCTTCTATATGATTC
CGCCGATCTTTCGCTATATCTTCCTTAGTGCTCCAGAACAGAAGGATCCC
CACAGTATGTGCATGGATGACCGGCTGACGCCCTTCATCCTCCAGAACTT
TGAATTCGATGCCAATATCCGTCACGTGTCACCAGCGAAAATGCCTGGTG
AACGCGATTTCACGCCCTACGTCGGCAACGGCTACCTGGGCCTGGAGATC
GCACACGACGCTTTCCTGAACATCAAGAATGGCAGGGCCATGCAGCTGCC
TATTCCTTTCCAGCCGGTGGTCTCCGTTTCGGGAGGATCCGCATCTGGCG
GCGAAAAGGAAGCCACTGTCGTCGAATATCTGACGGGAATGGTGCATCGG
TTCCAATGCTTTGCCGGTTACTTTGTTTCGTACACCTACTACGCCCATCG
CACTCAGCCGAATATCTTCATGCAAGAGCTGCAGATCACAAACACCAGGA
ACCTCTTGGAGGACATAGAACTGATCATGCCACGCGTCAATCTCCAGAAG
CTCACCAGGCGAACTGTTCCCCTAAGTGAACCCGTCTCCGTGGGAGTGTT
CACCTACACAGAGTTGGAGGTGCTCTCGGGCACAGTCCAGCTTCAGGCAG
AAAATCCCAGTAAATCCATTGTTATAAGCATAGTGAAGCCGCAGATGGAC
TCCAAGCTGCAGCTGAGAAAGCGCGGCACAGTGCGAATTGTGTATCCCAC
AGCAGTGCATTACTCAAAACCAGTGGCGGAGGAAAAAATCGGTGGTATAA
GCGAGACCATCGAGCAGCAGCCCCTCAGCGATGGCGAAGCTGCTCCAAAA
GCTTGGCTCCAGCCCTCAAACCAGGATCCTTGACAGCGTAAACATCTATC
GCCAGAGCACATTGACGTTGGACTGATTGTGGGCCACTGGATTTACAATA
GCTGTTCAGCGAAATAGCTGACGGCACGCATCATGCCGAGTATGCAGTTC
TCTC
UFO05891.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7289-RA | 2130 | CG7289-RA | 96..1145 | 9..1050 | 5020 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1982546..1983409 | 195..1050 | 3890 | 98.8 | Plus |
| 2L | 23513712 | 2L | 1982312..1982498 | 9..195 | 935 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:30:22 has no hits.
UFO05891.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:34:20 Download gff for
UFO05891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7289-RA | 79..1124 | 9..1046 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:26:23 Download gff for
UFO05891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7289-RA | 96..1141 | 9..1046 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:14:32 Download gff for
UFO05891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7289-RA | 96..1141 | 9..1046 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:14:32 Download gff for
UFO05891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1982312..1982498 | 9..195 | 100 | -> | Plus |
| 2L | 1982547..1983405 | 196..1046 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:26:23 Download gff for
UFO05891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1982312..1982498 | 9..195 | 100 | -> | Plus |
| arm_2L | 1982547..1983405 | 196..1046 | 98 | == | Plus |
