UFO05892.5prime Sequence
1070 bp (953 high quality bases) assembled on 2009-07-20
> UFO05892.5prime
CAGTCGACATGCTGTGGACGGTGCATCTGGACGGTGGGCCACAGCGGGTC
AATCACGCAGCGGTGGGCGTGGGCGACTTCATCTACAGCTTTGGTGGCTA
CTGCACCGGATACGATTATCGCTACAATGAGCCCATCGATGTGCACGCCC
TGAATGCACACACAATGCGCTGGACTCTGGTGCCCCAGCAGCTGGACGAC
GCGGGTGTGCCACTCAAGTATCCGCTGGTGCCCTTCCAGCGCTACGGACA
CACGGTGGTGGCCTACAAGGATCGCATCTACATTTGGGGCGGTCGCAACG
ACGAGAATCTCTGCAATACCCTCTACTGCTTCGATCCCAAGACAGCGCAG
TGGTCGAGGCCCCAGGTCACTGGCTGTCTACCCGGAGCGCGGGATGGTCA
CTCGGCCTGTGTCATTGGCAATAGTATGTACATCTTCGGTGGATTCGTCG
ATGAGATCAACGAGTTCAGCAGCGATGTGCATTCCCTTAATCTGGACACC
ATGGAGTGGCGCTATGTTCAGACATTTGGCGTGCCGCCCAGCTACAGAGA
TTTTCATGCGTCGGTGGCCTACGAACAGGAGCGAATGTACATCTTCGGCG
GGCGGGGCGATAAGCACAGTCCGTACCACAGCCAGGAGGAGACCTACTGT
CACGAGATCGTCTACCTGGACATGAAGACCAAGGTGTGGCATCGACCGTT
CACGGCCGGTAAGGTGCCCGTTGGTCGACGCAGCCACAGCATGTTCGTTT
ACAACAAGCTGATATATGTCTTCGGTGGCTATAATGGCCCTGTTGGATCA
GCATTTCAACGATCTGTACACCTTCGATCCGCGCACCAAGCTGTGGAACC
TGATACGGGCCAACGGCAAGGCACCGACGGCGCGTCGGAGACAGTGCGCC
ATTGTGATGGGCACTAGATGTTCTGTTTGGCGGCACCAGTCCAGGAGCGG
CTCCTCCAGCTCGCCGCAGCTGTTTCACCCAACTCAGAGACGGCGGGCCG
CACGGCTGGCGGAATGTTCCGCCGGGGTGGCGCTTATCGACTACCGCGGA
TCTGCATGTGTCTCGACTTT
UFO05892.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12081-RB | 1964 | CG12081-RB | 338..1408 | 6..1070 | 4980 | 98.4 | Plus |
| CG12081-RA | 1900 | CG12081-RA | 338..1408 | 6..1070 | 4980 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8589148..8590209 | 6..1060 | 4670 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:30:28 has no hits.
UFO05892.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:34:21 Download gff for
UFO05892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12081-RA | 322..1395 | 1..1070 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:26:28 Download gff for
UFO05892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12081-RA | 335..1408 | 1..1070 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:14:36 Download gff for
UFO05892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12081-RA | 335..1408 | 1..1070 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:14:36 Download gff for
UFO05892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8589145..8590218 | 1..1070 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:26:28 Download gff for
UFO05892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8483178..8484251 | 1..1070 | 98 | | Plus |
