UFO05911.5prime Sequence
1058 bp (955 high quality bases) assembled on 2009-07-25
> UFO05911.5prime
CAGTCGACATGATCCGCATCCGATTTGGAATGGATGTGCTGCTAGTTTTG
CTACTTGCCACATGCCTGCTGACCCCTGCACATGGAACGCCACTGGAGTG
GGACTTTGCCGTCACGCTGAGGACGAAGATCCAGTTCATGGACAGTTCCT
GGCAGACGATAGCCACCGCCGCCCATGAGTTCGACGAGCTGTCCGCCCTG
ACCTTTGATGAGTCGGAGGAGCTGATCTACTTCAATGACCTGAAGCACCG
CAATGGCAGCATATTCTCCCTGAAACGGGATCTCATTGCCGCCAACCACG
TGGCGGAGCAAACGATCGCACGCACGGGTAATGAGTCGGTGGGAGGACTA
GCCTACGACCCACTGAACATGAACCTCTTCTGGTCGGACACCGAGCAGAG
AAAGATCTTCTTTGCACCCATTCACGGCTCTGCGACGCCCCAGGTTCTGG
TGGATCTGAGCGCGGAGGGTGGACGACCAGATGGCGTGGCAGTCGATGTG
TGCCGCCGCAAGCTGTACTGGACGAACTCGAACGTCACGCATCCCACTGT
GGAGAGGATCAATCTGGATGGCAGCAATAGGACCGTGATCATCAGCTCCA
ACATCGATATGCCCAGGGGAATCGTGGTGGATCAGCTGTCGGATCGCCTC
TTCTGGATTGACGACCTGAAGGGCGTGTTCTTCTCGGTAGAGAGCTCCAA
ACTGGACGGTTCCGATCGTCAGGTGGTGCTGAAGGACAAGCACCATGAGC
CCCTCAACCTGGCCGTGACCAACGATGCCATCTACTGGACGGATCGTACT
ACCAGGGCCGTTTGGAGTCACCCGAAGTGCCGGTGATCAAGGTTACCACC
ACTAGCAGCCAGACGAGGAGGATTCCACTGATTCCACGGACTTCAGACCC
CGAGCCGGTGGCGAGGACTGTCCGCTGGTGCGCGTGCATCTAGCGAGGAG
CGCGAGATGTGGCCCGCACCGGCTCTACAGAGACTGCAGAGACACATGGC
TAGCATTGGTGCGAAGGTGAGGACGCTTGACGACAAACAGAATGGAATCG
CTCATGCT
UFO05911.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cue-RA | 2801 | CG12086-RA | 266..1262 | 9..990 | 4640 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1504955..1505793 | 935..102 | 3980 | 99.4 | Minus |
| 3L | 28110227 | 3L | 1516913..1517006 | 102..9 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:18:42 has no hits.
UFO05911.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:36:41 Download gff for
UFO05911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cue-RA | 226..1236 | 1..996 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:18 Download gff for
UFO05911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cue-RA | 259..1269 | 1..996 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:33 Download gff for
UFO05911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cue-RA | 259..1269 | 1..996 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:33 Download gff for
UFO05911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1504883..1505792 | 103..996 | 98 | <- | Minus |
| 3L | 1516913..1517013 | 1..102 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:18 Download gff for
UFO05911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1516913..1517013 | 1..102 | 96 | | Minus |
| arm_3L | 1504883..1505792 | 103..996 | 98 | <- | Minus |
