UFO05913.5prime Sequence
1100 bp (985 high quality bases) assembled on 2009-07-25
> UFO05913.5prime
CAGTCGACATGGATACATCAAAGATTAGTGCCAGGTACTCGAAAGTAGAC
CTGTTAGCTCTAAGATATGAAGGTAAAAGTCGACAGCGCCCGCAATGTTC
AACACGACTTGAATTGCAGACGCTAGGTTTTTGGAAAATTAATCTGAACA
CAGCTGCGTTAACCGTGTCCAGCGCCTATTCTAATCAAAACAAGAATCGA
CTTTCTCCAGAAGCAGATAACTCGAGCTTAATTTGTTCCAATAGTAGCTC
AATAAGTTCACGTCGCGCTATGAGAAATCGAGAACGGGCAAACAACTATT
ACCAGCGCTTCGTACCTACCGATTCTCTTCTAATAAGTGGGGAGGATAAA
GATAAGGATGCGCTTTCTCATGGACAGCCCTATAAGTTGAATATCATCGA
TCACCGTAGCATATCATCTTCACATTTAATGCCGGCATTTGCAAAGAGGC
GTTTTGTCATATCGAAAGGCAGCAACAGCGAGGAAAGCAACGAGGGGATA
AACACTTGTGCAAGCAAGGGCAAGGCAGCCAGTTCGCCTAGCCGTAAGGG
TAGCGAGTTGGATACTGCTGAGACATGTTTGAATTTTGTTCAGCCGGATC
ACGACCAATGCATGTCATCTTCACCTACATTTTCAACATCCCGCCAAGAA
AGGCGGATTGGTAGCGGTCGGCTGTTGCCAAGAAGTGATAATTGGGATTA
CAAAAACGAAAAGACCGTAGAAGCCAGCATTGAGAATGAAAAGGAAACAT
CTCCAAATGGATCTGGAAGTACAAGCAGTCTTAATCAGCACAATCAAAGC
CAACATCGTTCTCGAACATTCAGTGGAAAGTTAGTTGAACGTGTTCCCGA
AGTCACAGATCGTCGTTTTCAATATGACTCCAAAAGTCTTTTGATCGTCA
GGAATTAATAATCGACGCATTTCTGGTAAGAGCTTTCAGTACTCAAAGCG
AGCAAGCGTGCATTCCTATCTCATCACGAGACTGATGCTCAGTGCAGGAC
TAAATCCAGCTAGAACTATGATCTACCCGTTGAGACTTGTTATACGATAC
GATCGTAACTGAGATAAATATCATCACACTGATAATTGACCGCCAGCAGC
UFO05913.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4E-T-RH | 3376 | CG32016-RH | 140..1175 | 9..1026 | 4710 | 98.1 | Plus |
| 4E-T-RG | 3526 | CG32016-RG | 197..1232 | 9..1026 | 4710 | 98.1 | Plus |
| 4E-T-RC | 3691 | CG32016-RC | 362..1397 | 9..1026 | 4710 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 956971..957891 | 949..33 | 4395 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:00:24 has no hits.
UFO05913.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:34:52 Download gff for
UFO05913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-RC | 322..1365 | 1..1029 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:31 Download gff for
UFO05913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-RC | 357..1400 | 1..1029 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:29 Download gff for
UFO05913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4E-T-RC | 357..1400 | 1..1029 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:29 Download gff for
UFO05913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 956877..957889 | 35..1029 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:31 Download gff for
UFO05913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 977503..978515 | 35..1029 | 97 | <- | Minus |
