UFO05915.5prime Sequence
1033 bp (573 high quality bases) assembled on 2009-07-25
> UFO05915.5prime
CAATCCACATGGTGGAGCTAAAGATGGGCGATCACAGCGTGGAGGCCACC
ACCTGGGATCCCGGCGACAGCAAGGACTGGTCGGTGCCCATTAAGCCGCT
AACGGAGAAATGGAAATTGGTGCCGGCATTCTTGCAAGTAAAAGGATTAA
TGAAGCAGCACATTGATTCCTTCAATCACTTCATCAACGTGGACATAAAA
AAGATTGTGAAGGCTAACGAGCTGGTTACCAGTGGAGCTGATCCTTTGTT
TTACCTAAAGTACTTGGATGTGCGGGTGGGCAAGCCGGACATCGACGATG
GCTTCAACATCACCAAAGCGACCACACCGCACGAATGCCGTCTGAGGGAC
ACCACGTACTCCGCCCCCATCACCGTGGACATCGAGTACACGAGGGGAAC
CCAGCGGATCAAGCGGAATAATTTGCTCATCGGAAGGATGCCCCTCATGC
TGCGCTGCTCCAATTGCGCCCTTACCGGCAAGTCGGAGTTCGAGCTGTCC
AAACTGAATGAGTGTCCACTAGATCCTGGCGGCTACTTTGTGGTGCGAGG
TCAGGAGAAGGTTATCCTCATTCAGGAGCAGCTGTCATGGAACAAAATGC
TCACCGAGGACTTCAACGGTGTGGTGCAATGCCAGGTTACCTCCTCCACA
CACGAAAAGAAGTCACGTACTTTGGTGTTGAGCAAGCATGGAAAGTACTA
CCTCGAGCACAACTCGATGACGGACGACATACCCATTGTGGTGATCTTTA
AAGCTCTGGGCGTATTTTCCGATCAGGATATTCAATCGCTAATTGGCATT
GACAGCACATCGCACACTACATTCTGTGCCTCACTAATAGACGCATACAA
CCTGAAGGTCTTCACACGTTAATGGCTTTGGAGTACATGAGCTCCAAGGT
CGTCGGTCAAGCGTTTTCAGAGTGCACCACTAAAACTCCATCGGAGAGCC
CGTGGAGCTGCTGTTACTACATTTTGCTGCATGTGCCTGGAGACCACTTT
ACTGCGATGAGGCCTCTATGTATCCATGATGGT
UFO05915.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpIII128-RA | 3532 | CG8344-RA | 79..1112 | 9..1033 | 4435 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12039119..12040000 | 9..889 | 4105 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:37:49 has no hits.
UFO05915.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:34:54 Download gff for
UFO05915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpIII128-RA | 23..1063 | 1..1033 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:51 Download gff for
UFO05915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpIII128-RA | 23..1063 | 1..1033 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:02 Download gff for
UFO05915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpIII128-RA | 72..1112 | 1..1033 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:02 Download gff for
UFO05915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12039112..12040001 | 1..890 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:51 Download gff for
UFO05915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7926617..7927506 | 1..890 | 97 | -> | Plus |
