UFO05918.5prime Sequence
1131 bp (1027 high quality bases) assembled on 2009-07-25
> UFO05918.5prime
CAGTCGACATGTTCGCAAGTCAGAGCAAGGCTTGTGATTCTCCGAGTGAG
ACTGTGCACCTACAGTCTTTACCAAATCATATTGAAGATCTAAAATTTAG
AAATTCTGATGTTGAAACGGATGATGATCTTCACTTCCCTGGAATTGCAG
CTAAAAATAAAATCTTGAAGCTTAGCTGGTGGCATTCTCCTGTTGATATG
CATTATGTAGCGACAGAATCAGTGCAACCAAAAAAAAGTGATAAAGTACC
GAGCAATAAAATTAAAAAAGTTGAGAACAATAATACTTTAGTTAATGGTT
GTAGTAAAACTTCAGCAAGATCTGTTCCATTACTCAAATATAATCGTCCA
GACCAGGATGGGGACAGCGAAGAAAACATAACAAGCGTTCTTGAGCCAAA
CGTTGATGAAATCTATTCTAAAGACTCAGAACGGCTTGTGGATGATTCAA
AACCATGTATTGGACTATTAAATCCAGATCAGGAGGATCAAATGAAAGTA
TGCGGTTATCGACGTTCTCTTATGCGAACTGGTTTTTGTTGGGCATGCAT
CTTCTTAACTGGAGGTCTGTTGCGCCTCGTGTTACATTGGTGGCGTCATT
TATATTTATATGCCACTTGCTCTCAATGTTCATTGGAGGAGGCAGAACAG
GTTTTGGTAACAGAGGATTATCAAGGAAAGCACAAAATGTACCATGTAAA
GCAAATTCAAGTCCTAACGTCGAGCAACCTTAAGACACTTTTGGAAAAGG
AACAGCAATCCATAGAAAGAACTCATATAGAATGCGATCATGTAGAAAAC
GTCCTTCAACTGTCAGTTCATTTTACCTCGGCCCAATTCAAAAAATGCTC
ATCAATACGAATTTTTCGCTGCAAGCAATTGGTTTATGCTTGGACAATAA
TACAAATAGATTTCAAGGATAAATGGACTCGACCTAAATATTCCTTGTTC
ATATTATCACCAACAGCGTGATTACCTGTACATGAACAGATTTCAAGGCG
AATTGTTTTCGAGAAAATGAAAATAACTGTACCATGCAGATTTCAAGACT
GCTGTTCTTAGAAGTACTATCTTTACGTTTCATTATTTTCTGTATCTCTA
CATGATACATTACATGCTGCAACCCTGAGTC
UFO05918.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32000-RH | 5743 | CG32000-RH | 1060..2160 | 9..1094 | 5105 | 98.3 | Plus |
| CG32000-RD | 3219 | CG32000-RD | 1056..2156 | 9..1094 | 5105 | 98.3 | Plus |
| CG32000-RG | 4782 | CG32000-RG | 234..1199 | 143..1094 | 4410 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 134529..134964 | 9..444 | 2180 | 100 | Plus |
| 4 | 1348131 | 4 | 136878..137168 | 444..734 | 1455 | 100 | Plus |
| 4 | 1348131 | 4 | 137391..137622 | 844..1068 | 730 | 92.7 | Plus |
| 4 | 1348131 | 4 | 137223..137332 | 734..843 | 550 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:16:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 1792..1898 | 217..321 | 115 | 58.9 | Plus |
UFO05918.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:35:06 Download gff for
UFO05918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32000-RH | 1051..2161 | 1..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:43 Download gff for
UFO05918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32000-RD | 1051..2161 | 1..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:38 Download gff for
UFO05918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32000-RD | 1051..2161 | 1..1099 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:38 Download gff for
UFO05918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 137391..137635 | 844..1076 | 93 | -> | Plus |
| 4 | 134524..134964 | 1..444 | 99 | -> | Plus |
| 4 | 136879..137167 | 445..733 | 100 | -> | Plus |
| 4 | 137223..137332 | 734..843 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:43 Download gff for
UFO05918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 155150..155590 | 1..444 | 99 | -> | Plus |
| arm_4 | 157505..157793 | 445..733 | 100 | -> | Plus |
| arm_4 | 157849..157958 | 734..843 | 100 | -> | Plus |
| arm_4 | 158017..158261 | 844..1076 | 93 | -> | Plus |
