Clone UFO05919 Report

Search the DGRC for UFO05919

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:59
Well:19
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO05919.5prime Sequence

1092 bp (977 high quality bases) assembled on 2009-07-25

> UFO05919.5prime
CAGTCGACATGACGTTTCACAAAACCTTTGGTTACGGATGCATTGTATTA
ATATGTTTTGAACTCCTGTTTGCTGGAGTTGAAACGTCCAGCGAAAATGA
TGATGAATATTTAACACAGAAAGAAATCATATTAGAAAAGTCATATCACG
GTTTAATTCGAGAAAATGAAACACTTGTAGAAATAACTCCCCTTATTAAA
GTGAACGAAGAGAAAATTTGTAACTTCCATATTCTCAAAAAACCGTATCA
CGAAATTCCATTTAAGATTGAACTGGTAAATAACCTAGGTATTTTAAAAG
CACGTCGGACACTAAATTGCGAGAATCGTAAAAGTTATCACTTTGAAATC
TGTGCAATCTATTGTGATGGAACACCTTCAAATACAGCCAATGTTCATAT
TACTGTTATCGACGTAAATGAGTATGCTCCAACATTCTTAGAACCGTCTT
ACGTAATTGAAGTAGACGAGGGAAGACTTTATAACGAGATCCTAAGAGTC
GAAGCTTCCGATAAAGACTGCACTCCGCTCTTTGGTGATGTTTGCAAATA
TGAGATTCTTAACAATGATGAACCATTTTCAATAGATAACGAAGGTTCAA
TTAAAAACACTGAACCACTTTCTCACAAAGCTTCTCATAACCACATTCTG
TCCGTGGTTGCCTATGATTGTGCAATGAAAGAATCTGCACCCATTATGGT
CAGCATTAAAGTTCGACGCGTTTGTGAAACAAAGTTTGTAGGCATGCCAG
ACGCATTGACTACACGTCTGGAAGCACCGAAAGCCTTCAATTGTTTCCCA
ATGCTCGCCTAGACTTATGTGACATTTCTTGCAAAAATGAAGAGACCTTA
GGATTCATTCTTCCATAGCCCTTAGACAAGCACATCTCATTCTGGGTGCG
ATCGGGATATATCTAATTGCACTTCAGCCAAAAAGTGAAGACCTTTGCAC
ATGGGGGCAGATGGACTAAAGAGTTAGTATGACGAGTCTAGACCATATTT
CACTTTGATGGGTCTACTGGAGGTAGTAGTCCTGCACCTGTTATTGATCT
TACGATTTTCATCGCACCTTAGCATTCTAACTATCGACCACA

UFO05919.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:57
Subject Length Description Subject Range Query Range Score Percent Strand
Cals-RD 6077 CG11059-RD 187..1275 8..1078 4875 97.7 Plus
Cals-RC 3696 CG11059-RC 184..1272 8..1078 4875 97.7 Plus
Cals-RB 3872 CG11059-RB 187..1275 8..1078 4875 97.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:55
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 1120106..1120613 766..260 2475 99.6 Minus
4 1348131 4 1120659..1120803 266..122 725 100 Minus
4 1348131 4 1121459..1121574 123..8 580 100 Minus
4 1348131 4 1119939..1120048 874..766 500 99.1 Minus
4 1348131 4 1118823..1119014 1059..878 305 89.2 Minus
Blast to na_te.dros performed on 2014-11-28 18:59:56 has no hits.

UFO05919.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:35:08 Download gff for UFO05919.5prime
Subject Subject Range Query Range Percent Splice Strand
cals-RB 173..1270 1..1081 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:11 Download gff for UFO05919.5prime
Subject Subject Range Query Range Percent Splice Strand
Cals-RA 178..1275 1..1081 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:15 Download gff for UFO05919.5prime
Subject Subject Range Query Range Percent Splice Strand
Cals-RB 181..1278 1..1081 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:15 Download gff for UFO05919.5prime
Subject Subject Range Query Range Percent Splice Strand
4 1121459..1121577 1..123 96   Minus
4 1119937..1120047 767..875 98 <- Minus
4 1120106..1120606 267..766 99 <- Minus
4 1120659..1120801 124..266 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:11 Download gff for UFO05919.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_4 1140563..1140673 767..875 98 <- Minus
arm_4 1140732..1141232 267..766 99 <- Minus
arm_4 1141285..1141427 124..266 100 <- Minus
arm_4 1142085..1142203 1..123 96   Minus