UFO05924.5prime Sequence
1025 bp (897 high quality bases) assembled on 2009-07-25
> UFO05924.5prime
CAGTCGACATGATTTCCGAAGTGGACTCCATAAATAAGGATAGTTCAGTA
CGTGTTGCTGTCAGAATCCGACCTCAAAACTCGAGGGAGCTAATAGATAT
GTGTCGTATCTGCACGACCGTCACTCTTGGAGAGCCTCAGATTTTTCTTG
GATCTGACAAAGCCTTTACGTTCGACTATGTTTTTGATACCAATTCCAAT
CAGTGTGATATATACTCGGACTGCGTGGAAAAATTAGTAGATAGTACCCT
CCATGGCTATAATGCCACCGTACTCGCCTACGGGCAAACAGGATCGGGAA
AAACGTATACAATGGGCACTGGTTTCGACCACGAGTCGGAGTCATCCGAT
TCCGTTCAGCTTGGCATTATTCCACGGGCTGTTCGTCATATATTCAGTGG
TATCGAACAACTGGAGGGATCCAGCACTTCAGAACATCCAGCGGCTGGTG
GAAGTCCGCAGTTCAGTTTGGCTGTTCAGTACATCGAATTGTACAACGAG
GACATCTTCGATCTGCTGGACCCGTTCAACAAGAACAGCAACTTTAAGAT
ACACGAAGATGCCAGTGGACAAATCACAATATCTGGGGCATCGATAAAAC
CCATTTATCAACCGCATGATGCCTTAAAGTACCTTCAGCAAGGAGCATTA
GCTCGCACCACTGCATCGACAAAAATGAACGACCAGTCATCCCGCTCGCA
TGCACTGTTCACGATTTTTGTGCGCAGACAGCGACTGCTCACCCCCAGTG
ATAATGTTCCGGATACGACCTGAGACCCTGACCTCCAAGTTCCATTTCGT
CGACTTGGCTGGTTCGGAAAGGCTCAAGACTCAGCCACTGGCGAGCGAGC
TCGCGAGGCATATCATAACTGTGACTTCTCGCACTGGGTATTGCATTTCG
GCGCTCGCGACAATCAAAGGCACTGCACGGGCCCTATCGGACTCTAGCTG
ACCGACTTCTGCAGACTCCTGGGCGAATAGTCGACCTGAGATCGCCTGCT
GTCCCCAGGATCGACTCTGAAACTG
UFO05924.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp31E-RE | 3843 | CG5300-RE | 134..1159 | 9..1007 | 4465 | 97.2 | Plus |
| Klp31E-RC | 3826 | CG5300-RC | 114..1139 | 9..1007 | 4465 | 97.2 | Plus |
| Klp31E-RB | 3725 | CG5300-RB | 13..1038 | 9..1007 | 4465 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10414980..10415411 | 200..631 | 2160 | 100 | Plus |
| 2L | 23513712 | 2L | 10415470..10415759 | 629..907 | 960 | 95.2 | Plus |
| 2L | 23513712 | 2L | 10414777..10414919 | 61..203 | 715 | 100 | Plus |
| 2L | 23513712 | 2L | 10414602..10414657 | 9..64 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:00:48 has no hits.
UFO05924.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:34:51 Download gff for
UFO05924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp31E-RA | 117..1119 | 9..987 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:46 Download gff for
UFO05924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp31E-RB | 13..1015 | 9..987 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:42 Download gff for
UFO05924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp31E-RB | 13..1015 | 9..987 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:42 Download gff for
UFO05924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10414602..10414657 | 9..64 | 100 | -> | Plus |
| 2L | 10414781..10414919 | 65..203 | 100 | -> | Plus |
| 2L | 10414984..10415408 | 204..628 | 100 | -> | Plus |
| 2L | 10415470..10415852 | 629..987 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:46 Download gff for
UFO05924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10414602..10414657 | 9..64 | 100 | -> | Plus |
| arm_2L | 10414781..10414919 | 65..203 | 100 | -> | Plus |
| arm_2L | 10414984..10415408 | 204..628 | 100 | -> | Plus |
| arm_2L | 10415470..10415852 | 629..987 | 93 | | Plus |
