UFO05932.5prime Sequence
818 bp (55 high quality bases) assembled on 2009-07-25
> UFO05932.5prime
CAATCCACATGAGCACTTTTAATCCAAAGTTCCTAAGACCCGAGACGGAC
GATGCATTCACAGATAGTGCCGGTGGTGAACAGCAATCCTCCCCCTTTGT
ATTCAATGTCAATCACAATATGGGACTCATGGACCAGAGGGAACGTTTGC
CCATTCGTCACTACCGGGATCAAATACTTTACTGGTTGGAAAATCATCAA
GTGGTCCTACTAGTGGGTGAAACAGGCAGTGACAAGAACACCCAGGTGCC
ACTTTATTTGTATGAATGGGGCTGGCACACCAAGGGACTCATTGGCATCT
CCGAACCACGACGCGTTTCCACCGTTACGCTGGCTAATTCGTGGCACAGG
AACGCGGCGAACTGGTAGGTGACACGGTGGGCTATGTAGTTCGCTTCCTG
GAAAGCATGAACTCCTGTACCAAAATCAAGTTCATGACCGAGGGCATCTT
GCTGAGGGAAGTCCTAGCCGATCCGCTGCTCGCCCAATATGGTGTTATCA
TCGTGGACGAGGCGCACGAGCGGAATATGCTCACCGACATGATTTTGGGA
CTGCTCAATAAGATCCTTCGCAAACGCAGCTCGCTCAAGCTCATCATTTC
ATCGGCCACCATAGATGCAAGCTTCTTCAGCGAGTTCTTCAGCTGGCCAG
GATCGGGCGAAGTGAGCGTTAAGCTAAGCATTGAAGGTCGCATGCATCCT
GTGAGTAATTTCTATCTGAACGAACCCTGCGCCGATTATGTGAAGGAAAC
TGTGGATACCGTCTGGGAAACTGCATCATAGGGAACCGCCTGGCTACATT
TTGGCCTTCCTAACTGGC
UFO05932.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3225-RA | 2387 | CG3225-RA | 80..889 | 9..818 | 3645 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4817169..4817663 | 818..324 | 2245 | 97.8 | Minus |
| 2L | 23513712 | 2L | 4818038..4818166 | 137..9 | 555 | 95.3 | Minus |
| 2L | 23513712 | 2L | 4817720..4817818 | 325..227 | 420 | 94.9 | Minus |
| 2L | 23513712 | 2L | 4817882..4817976 | 229..135 | 415 | 95.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:50:44 has no hits.
UFO05932.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:35:33 Download gff for
UFO05932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3225-RA | 45..854 | 9..818 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:10 Download gff for
UFO05932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3225-RA | 80..889 | 9..818 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:53 Download gff for
UFO05932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3225-RA | 80..889 | 9..818 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:53 Download gff for
UFO05932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4817169..4817663 | 324..818 | 97 | <- | Minus |
| 2L | 4817722..4817815 | 230..323 | 94 | <- | Minus |
| 2L | 4817882..4817973 | 138..229 | 95 | <- | Minus |
| 2L | 4818038..4818166 | 9..137 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:10 Download gff for
UFO05932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4817169..4817663 | 324..818 | 97 | <- | Minus |
| arm_2L | 4817722..4817815 | 230..323 | 94 | <- | Minus |
| arm_2L | 4817882..4817973 | 138..229 | 95 | <- | Minus |
| arm_2L | 4818038..4818166 | 9..137 | 95 | | Minus |
