UFO05934.5prime Sequence
1055 bp (935 high quality bases) assembled on 2009-07-25
> UFO05934.5prime
CAGTCGACATGACAAAAATAAAGAATCTGCTGAGTTTTGTGACCCAGTCA
CGGGCCATATCGCACACCAATCCCAGGGAACATATACTTAACTGCCTGAC
CTATGGGCTACTAGTCATTGTGGCGCTCTGCGCGGGTTTTCTGCTTTGGG
ATCTCTCCAGCAGCCCACGGGATGGATTCTTCCATGGGAAAAGGGACTCG
CACACATTAATCCTCGACCTGGAGCACATCCAGGAGCTTGCCGTAAATCC
GGAGGCCGAACAGCGGGCACGGAATGTAAACTGCACCTTCTGGGACTGCC
TGAACATCTACAAATGCGAGCACGACCGCCTAAAGGTCTACATCTATCCG
CTGCAGGAGTTTGTTGACGAGCAGAGCGACAAAACGGCCACCACCCTGTC
CAGCGAGTACTTCCAAATATTGGAGGCGGTACTAAAGAGTCGCTACTACA
CGTCCAATCCGAACGAAGCGTGCCTCTTTCTGCCCAGTTTGGATCTCCTG
AACCAAAATGTCTTCGACAAGCACTTGGCGGGCGCTGCCTTGGCTTCACT
GGACTTCTGGGATCGTGGTGCCAACCACATCATCTTTAATATGCTGCCCG
GCGGAGCTCCATCCTATAACACTGTGCTGGATGTGAATACGGATAATGCC
ATCATTTTTGGCGGTGGCTTTGACTCTTGGTCTTATCGCCCGGGCTTTGA
TGTCGCCATTCCAGTCTGGAGTCCACGATTGGTGCGACAACATGCACATG
CGACGGCCCAGAGGAAGTTCCTATTGGTAGTAGCCCATCTGATCATTCTT
CCGCGCTTTGTGAGGACTCTGATGGAGTTATCTCTGGCTCACAGCGAGCA
ATTGCTTCTTTTGGGAGCCTGCGAGAACTTGGATCTCACATGCGCTGCCC
TTTGTCGCAGCATCACAAATCGCTGGAGTATCCTCGGCTGCTGTCTCGCG
GTAAATTTGCCTGCTACGTCGTAGTCTTCGCATGGGGCACCCGATCTAGT
CAAGATCATGTCCTAGCCACTGAATTCCGTCATGGCGTGAAACTAGTGCT
ACGCC
UFO05934.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ext2-RB | 2694 | CG8433-RB | 63..1084 | 9..1028 | 4835 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16147651..16148657 | 1012..9 | 4750 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:50:11 has no hits.
UFO05934.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:35:20 Download gff for
UFO05934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10731-RA | 828..1846 | 1..1017 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:55 Download gff for
UFO05934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ext2-RA | 851..1869 | 1..1017 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:29 Download gff for
UFO05934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ext2-RB | 56..1074 | 1..1017 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:29 Download gff for
UFO05934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16147629..16148664 | 1..1034 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:55 Download gff for
UFO05934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12035134..12036169 | 1..1034 | 97 | | Minus |
