UFO05948.5prime Sequence
1117 bp (983 high quality bases) assembled on 2009-07-25
> UFO05948.5prime
CAGTCGACATGACAAGCATCGAGGAGAATCCGTTCGCGGCTCTGCTGCAG
GAGGGCGCCAACTCCGATGGCGTGCCGCACAAACTGGTCGAGGAGGTGCT
CCTCTTCACGCTGAACAAGGCGTCCTCTTCCGCGGTCCTGTGCCTGGCCG
ACGTGGTGGTGGAGACCAGCGAGGAGATGCTAAGTGAGGACCTGGTGGCC
CACGCCCTCTTTGAGCGCCTGATGCTGGCCGAGACCAGCCAGTATGCAGC
GGGCAATGCCAGTGAAATGGCCATGGAGCGGCGAGCTATGCGTTACCTTA
AAGGTGCCTTCACGCGATGCGGACTCATTCAGGCGGAGAGGAAAATCGAT
TGCTCCAAGATACTAGCGCTTATCCTAAACAATGCCAGCACCTGCATGCG
CCAGCCGGACCTCTTTGCACCGCAATCCTTCGGTGCCCAGTGGATGGAGA
TGTTCGAGCAGGATGAGGATGAGCACGATACCAGCACGCAGGAGTTTTTG
ATACGCGTCACCTGCAAGGTGATGGAGGAGGTGGAGCCGATTGAGGCCCT
GGGCGCCCTAAAGGCCATCTTCTACCCTGTGCTCACCGAGCTGCAGAAGA
ACATCGCCAAGCTGAACCTCATTACAATGAAGAAGAACACATTCTGGATC
CTCGGATATTTCGTGCGCGACAAGCGAGCAGCTGTTCTTGGAGAGCTGCT
AATTGACTACACCACTCCCAATCCCAGAGCTAGCGGTAGCGAATATATGG
ACACTTTGTTGGGCAGTCTACTGTGCATCTCAATCCTGCCCAAGACCCAA
ACAGGCAAATACGAGTTTTTCCAGGAGCTGTCAATAAACCAAACTGACGA
AGCTCTGTGGGCTCTATTGTCGCATCACCAGCAGTCCATTTTCCTGCTGG
TCAAGCAACTCCTCGTACTCCTCACCCGAAACAAAAGAAAAAGACGCTTC
AATGGGTAGGCAATTGCCTGGATGCAATGGTGCCGCGGTGGTCACCTATG
GGAGCAGCATCATGCCAGCCTGGAGCAAAACAGCCTCACAAGCACGTCAG
CGAATGCCTTCATAAACCAACCTGGACCTGGCAGTTCTAGTTCGCTCTCT
GGTGCTCTCCCCCTATG
UFO05948.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11070-RA | 3391 | CG11070-RA | 76..1162 | 9..1107 | 5060 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6658592..6659321 | 9..738 | 3650 | 100 | Plus |
| 2L | 23513712 | 2L | 6659378..6659669 | 735..1029 | 1200 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:17:14 has no hits.
UFO05948.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:35:43 Download gff for
UFO05948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-RA | 47..1066 | 5..1029 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:54 Download gff for
UFO05948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-RA | 74..1093 | 5..1029 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:47 Download gff for
UFO05948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-RA | 74..1093 | 5..1029 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:47 Download gff for
UFO05948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6658590..6659318 | 5..735 | 99 | -> | Plus |
| 2L | 6659379..6659669 | 736..1029 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:54 Download gff for
UFO05948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6658590..6659318 | 5..735 | 99 | -> | Plus |
| arm_2L | 6659379..6659669 | 736..1029 | 97 | == | Plus |
