UFO05950.5prime Sequence
1078 bp (967 high quality bases) assembled on 2009-07-25
> UFO05950.5prime
CAGTCGACATGTCGAAACGTGGGCAACCGGCGTGGCAAGCTCCCGAGGCG
GTGGATCGGCCGAAACTGAAGCTGTTCAACAGCCTGACGCGACAGAAGGA
GGACTTCGTGCCGCTGGACGGCAATAATGTAACGTGGTATAGCTGCGGAC
CCACCGTCTACGATGCCTCACACATGGGGCATGCTAGATCTTACATTTCC
TTCGACATTCTGCGGCGCATTCTGTCCGACTACTTTGGCTACAACATTCA
CTATGTGATGAACATTACGGACATCGACGACAAGATCATAAGGCGTGCGC
GGCAGAATCATCTCTTCGACGAGTACGCTGCTGAGGCGCAAAAGCTGCCA
CTGGATGAGCTGCTGGGTCAGCAAAAGGAGGTACTGCAGCGGTTTCAGGA
TACATGCGCCAAGAATACAGATCCCGACAAGAAGATTATGCTCGACAAGA
CACTGCAGCGGATGAACGATGCTGTGGAGGCGCTGACCAAGGCCGTTGGC
AAGGGTGATGAGCGGGAGATATCCGAGAAGCGGCTGCTTTACCTAAACGA
AGCCAAGGATCCAATTTCCGACTGGTTGGACTCGCTAAAGGGTGCTCAGA
TCAATGATAATGCAGTATTTGAGGCACTGCCGCGGTACTGGGAAGACCAG
TTCCACAACGACATGAAATCGCTAAATATTCTCCCGCCAGATGTTTTAAC
TCGCGTTTCGGAGTACGTGCCACAAATCGTCACCTTTATTCAAAAGATTA
TCGACAATGGCTTGGCCTATGCAGCCAACAACTCCGTTTATTTCGATGTA
AATGGCTTCGACAAGAGGGAAAAGCATCATTATGCTAAGCTGGTGCCAGA
AGCATATGGCGACACAAGTCCCTGCAGACGTGAACGCGATCTGTCCATCG
CAGAGATCGTCTCTCGAGAGCGTTCTGCATGACTTTGCTGTGAGCGAGCA
AAGCGCGACCCTGTGGGATAGCCCTGGCAGACGTCAGCTGCACATGATGC
TCGCATGCTCGGATTCTTTGACCACGTTTGAATTACACTTGCCGGTGTGA
CTAGTCCTCATAGACACGGCTGGCATCG
UFO05950.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-cys-RA | 2453 | CG8431-RA | 90..1073 | 9..975 | 4505 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16143480..16143971 | 186..677 | 2460 | 100 | Plus |
| 2R | 25286936 | 2R | 16144027..16144268 | 678..915 | 1000 | 97.1 | Plus |
| 2R | 25286936 | 2R | 16143236..16143414 | 9..187 | 895 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:05:27 has no hits.
UFO05950.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:35:55 Download gff for
UFO05950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-cys-RA | 87..986 | 9..905 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:40 Download gff for
UFO05950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-cys-RA | 90..989 | 9..905 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:27 Download gff for
UFO05950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-cys-RA | 90..989 | 9..905 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:27 Download gff for
UFO05950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16143236..16143414 | 9..187 | 100 | -> | Plus |
| 2R | 16143482..16143971 | 188..677 | 100 | -> | Plus |
| 2R | 16144027..16144257 | 678..905 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:40 Download gff for
UFO05950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12030741..12030919 | 9..187 | 100 | -> | Plus |
| arm_2R | 12030987..12031476 | 188..677 | 100 | -> | Plus |
| arm_2R | 12031532..12031762 | 678..905 | 97 | == | Plus |
