UFO05966.5prime Sequence
1165 bp (1025 high quality bases) assembled on 2009-07-25
> UFO05966.5prime
CAGTCGACATGGATATAGAAGAGCTGTTCGACTGTTTTGATGAAGTGACG
CCGTCGGTGCCGCCACCAGCACTTAACCAGGAGGAGAAGCCATCGGGAAG
CAGTGCCTCCAAGAAAGGAAATAAGCGCCAAGCGGATGGCACCACTGCAT
CGAAAGAAGCTACATCCTCCAAAGGAGCGGAGGGCGATGACAAAGGAGAC
GTCACTGAGGAGCCCACCAAGCGTCTGAAGCAGGAGGCGTCAACGGTTGC
GGTGGATGACGATAATAATGCAGATGACGAACCCACTCGTACCCTCGACA
TAGACGATTCCGCGACTCTGGAGGCCCTGCGGACCAGGATTGTCACGCAC
TTGTTGGACGCTCCCAAGTCATGCACCCACGAGGTTGCCGCCCATCCCGA
CCAGGAGTACATACCCCTAAAGCCGTTCAGCGGCGTGCCTGCAAAGGAGT
ATCCCTTCGTCCTCGATCCGTTCCAGCGCCAGGCGATTCTGTGCATTGAC
AACAGCCAGAGTGTGCTGGTTTCCGCCCACACGTCAGCCGGTAAGACGGT
GGTGGCGGAGTATGCCATTGCAAAATCATTGGCCGCCAAGCAGCGGGTTA
TATACACCACTCCCATCAAGGCTCTGTCCAACCAGAAGTTTCGCGAATTC
ACCGACGAGTTTAAGGACGTGGGCTTGGTCACCGGTGATGTGACCATAAA
TCCATCGGCCTCCTGTTTGATCATGACCACCGAGATTCTGCGAAACATGT
TGTACCGCGGTAGCGAGATCATGCGCGAGGTGGGGCTGGGTGGTCTTCGA
TGAGATTCACTACATGCGCGACAAGGAGCGCGGCGTCGTCTGGGAAGAAA
CGCTCATCCTTCTGCCGGACACGTGCGATATGTCTTTTCTTTCGGCCACC
ATTCGCAATGCTCGACATTCGCCGAAGTGGGTCTGCCACCTGCACAAGCA
GCCATGTCACGTGGTCTACCACCGATTATCGTCCCACTTCTTCTGCAGCA
CTACATCTTTTCCGGCGCGGGGGGCGATGCATTCATCTTATCGTCGATTG
AAAAAGGGGCAGTTCAAGGAGGGAACAACTTCACTACAGCATGGCAGTGC
TGGCCATGCAGGGAGGCCGCCAAGGGGAGATCAAAGGGAGCATGGGGCAT
AGACATGCGACAACA
UFO05966.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)35Df-RA | 3585 | CG4152-RA | 94..1212 | 8..1133 | 5120 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15752356..15753446 | 8..1106 | 4740 | 97.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:39 has no hits.
UFO05966.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:36:14 Download gff for
UFO05966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Df-RA | 100..1229 | 1..1139 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:28 Download gff for
UFO05966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Df-RA | 90..1219 | 1..1139 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:19 Download gff for
UFO05966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Df-RA | 90..1219 | 1..1139 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:19 Download gff for
UFO05966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15752352..15753453 | 1..1112 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:28 Download gff for
UFO05966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15752352..15753453 | 1..1112 | 97 | | Plus |
