UFO05980.5prime Sequence
1086 bp (970 high quality bases) assembled on 2009-07-25
> UFO05980.5prime
CAGTCGACATGGAAATAGCAGAGATATCTGCAGAAGATGAGGATGTGTTT
CACTTTGAGACCGAGCACCTGGCCCTGCGTGGCAACCAGTGCTATACCAA
TTTGCTGCGCACTTTGGCCGTGCTGCAGGCACAAAGGATTCGGGTGCATC
AGCAGATTGAGGAATTGGAAGCCACACAAAATATCTACTTGGAGAATCCG
CAACATATGCTGGACAAACTGCGAAACAACGAGCCTTTGATAGCGGATAA
TTACATCACCACGACCGTTCTACCGGACTTGCCAACTCTGTCGCCCAATG
ACGAGGAAGGGGGCACAAATGAGACACCGACCGATGCGTCTTCATGGACG
CAAGAGGCGAACAAGAATCGGGACAGGAGCAATGGACGGTCGGAGAATTT
CAATCGCTTGTGGACCAACGAAGAGCAGAGTCGCTTGGAGCAGCTGCTCA
TCCAGTATCCGCCAGAGGAAGTGGAAATGCGCAGATTCGGGAAGATAGCG
AAGGCCTTGGGCAACAGAACGGCACAGCAAGTGTATAGTCGTGTCCAGAA
GTATTTCCAAAAGCTGCACGATGCCGGAATGCCTGTGCCCGGTCGCATAC
CCAAGCATCGACGTCCTGGTTTGAGTAAGCCGAAGATCAAACTTCGCAAG
TCAACCTTCTTCCCCGCTCATAATATATCGCTACAAATGCCAGAGGACGA
TTTCACATTTGACGACCTGCGAATCCCATCGCCTGCGAGCGATATGCTCC
TTATGCCGGCATCCAAGATCGAACCAAAGATCGAATCCGAGTACATGGAT
GCCGATCTGAATGCGGAGTCAAAGCGAAAACAGGAACTATGCCTTAAGCT
TCTATCAGCCATTCAGACGAGAAACGGGAAATGGAGGACGGATATGAGCC
AGACTTGCTGGCCGCCAGTGTGCCGAGTGCGAGAGCATCTGTGACAGACC
ATGCGTTGTACAGTTGTTATTGTACTATCTGTGGCGGAGATGCCTGTCAG
TCAGCTATCGAGGGCGTTCAGCATTAGTCTTGAAGTTGTATGACAGAGTC
AGCAGCTCTCCAGAACATCGTTGGGCGCGGCCAGGT
UFO05980.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:32:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atac1-RA | 1230 | CG9200-RA | 76..1128 | 9..1040 | 4695 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:32:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6959328..6960253 | 932..9 | 4530 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:32:01 has no hits.
UFO05980.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:36:29 Download gff for
UFO05980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atac1-RA | 21..1019 | 3..991 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:06 Download gff for
UFO05980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atac1-RA | 73..1071 | 3..991 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:33 Download gff for
UFO05980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atac1-RA | 73..1071 | 3..991 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:33 Download gff for
UFO05980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6959328..6960256 | 3..932 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:06 Download gff for
UFO05980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6959328..6960256 | 3..932 | 99 | | Minus |
