UFO05989.5prime Sequence
1101 bp (989 high quality bases) assembled on 2009-07-25
> UFO05989.5prime
CAGTCGACATGCAGGCACCACCTCCGGAACACTGTCCTGGCGTCGAGAGC
GAGGAGGCGGGCAAGGGAAGTGCCTGTTCGGGCTGCCCCAACCAAGGACT
CTGCAGCGATCCCAACAAGAAACTCGAAGATCCCGGCAAGGCTTTGGTGG
TCGAATCCATGAAAGATGTCAAACACAAGCTGCTGATCCTGTCCGGGAAA
GGCGGCGTTGGCAAGAGCACGGTAACCAGCTTGCTAACCCGCTATCTGGC
CAGAAGTAATCCGGACAGTAACTTCGGCGTGCTTGATATCGACATTTGCG
GTCCATCGCAACCGCGTTTGATGGGCGCCCTGGGGGAGAGTGTCCACCAG
TCTGGGTACGGCTGGTCACCTGTGGGAATCGAAGACAACGTGTGTCTGAT
GTCCATCGGATTTCTTCTGGGCTCTGTGGACGATGCCATTATTTGGCGAG
GACCCAAGAAGAATGGCATGATCAGGCAGTTTCTGAGCGAGGTGGACTGG
GGAAATCTGGATCTCCTGCTACTGGACACACCACCTGGAACTTCCGATGA
GCACCTGTCTGTGGTTTCGTACCTGAAAGACGACGCCAACCCGGAGTCCC
TGCGCGCCGTGATGGTGACCACTCCACAGGAGGTGTCTCTGCTGGACGTG
CGCAAGGAGATCAACTTTTGTAAAAAGCAAAATATCCCCATTGTGGGCGT
GATCGAGAATATGAGCAGTTTCCGTTGCGGCCATTGTGGAAATAGCTCCG
AAATCTTTCCAGCCAAAACCGGAGGAGCCGCTGCCATGTGCGCCGAAATG
GGAATCCCGCTGTTGGGCTCCCTGCCTCTGGATCAACAGATATCCAAAGC
CTGCGATTCTGGCGAGGATTTAACTGAGTTTAAGATGTCACTACTGAGCG
CTGGACGATTTGCTCAAAGATTATGGCCAGCTTAGTGCAGCTTTCTATAC
ATCGTTTGGCGCGCGGGCCCAGGTAGTGTCATATCATATCATATCATATC
ATATCCCACTAGCTAGGAGATCTGTCATGACTATGCTGGATTCTCACAAT
AAAACGCCGCGCACGACGTCTGGAACAATCGATGGATTGAGGTCATACGG
A
UFO05989.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17904-RA | 1075 | CG17904-RA | 82..1011 | 8..933 | 4530 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16732631..16733560 | 8..933 | 4455 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:17:08 has no hits.
UFO05989.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:36:37 Download gff for
UFO05989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17904-RA | 65..1008 | 1..940 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:30 Download gff for
UFO05989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17904-RA | 76..1019 | 1..940 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:40 Download gff for
UFO05989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17904-RA | 76..1019 | 1..940 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:40 Download gff for
UFO05989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16732625..16733560 | 1..933 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:30 Download gff for
UFO05989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16732625..16733560 | 1..933 | 98 | == | Plus |
