UFO05994.5prime Sequence
1105 bp (997 high quality bases) assembled on 2009-07-25
> UFO05994.5prime
CAGTCGACATGAGTGCTCCTCGAGTGGGTGGCGTATTAGCTTTGGGTGCC
ACCGCCCTGGGCGCCTTTTATCTGGGCACCCACGTGGAACGCGAACGCCA
GCACAATGGCTCCACAAGTGGCCTTCCGCGGCTGCCTGGTCTGCCCACCT
TTGGAACTGTTTCGGCTGCCAGTTTGATTCCCGCCCAAGAGAACAATGTA
AGCTTGACGGCAACTCCGTCTCGGATCGGACAGATCATGAAGTATGGATT
TCCCGGACTCGATCACGTGCGCTCCCATTCGGACTACGTGCTGTCTTACG
ATCGGAGGAACCGGGTGCCCCACTGGGTGTTCGAGCACCTTACGGCAGAG
TCGGTGGCGAAGAACGATGCCGTGGACAGATCGAAGTGCGATTTCAAGCA
GGACGAGAGCATCCATCCGTTCTTCAGGTCACAGAACACGGACTACCGAC
GATCGGGCTATGATCGCGGGCACATGGCCGCCGCTGGAAATCACCGACTG
CACCAGAAGCACTGCGACGAAACCTTCTACCTATCGAACATGGCGCCACA
GGTGGGCCAGGGCTTCAACCGGGATGCCTGGAACACGCTGGAGGCACACG
TGCGCAGACTGACCAAGACCTACTCCAATGTGTACGTCTGTACGGGTCCA
CTGTACCTACCGCACAAGGAGGACGATGGGAAATCGTATGTCAAGTACGA
GGTCATCGGCGCCAACACCGTGGCTGTTCCCACCCACTTCTACAAGGTTA
TTGTGGGCGAGTCCGCGGACCACAAACTCCACATGGAGTCGTACGTGATG
CCCAATCAGGTGATCAGCAACGACACTCCCATCAGTGTGTTTCAGTGCCG
CCAGAGAGCGTGAACGCTCGGCGGGATTGCTCTTCTTCGATCAAATCAAT
CGCAAGCAGCTACCACCATCAATGGCAAAAAGTCGCAGCTTTCTAGACCA
TCGTTTGGCGCCGCGGGCCCAGGTAGTGTCATATCATATCATATCATATC
ATATCACACTAGGCTAGGAGTCCTGGTCATGACTAGTGCCTGATCTCACC
AATAAAAACGCCCGGCGGCAACGAGCGTCTGAACAATCGATGGAGTCTGA
GTCAT
UFO05994.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| EndoG-RA | 1124 | CG8862-RA | 81..1010 | 9..934 | 4550 | 99.6 | Plus |
| Tengl2-RA | 1018 | CG32463-RA | 476..576 | 471..571 | 250 | 83.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12177551..12178473 | 928..9 | 4465 | 99.7 | Minus |
| 2L | 23513712 | 2L | 2238746..2238846 | 571..471 | 250 | 83.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:13:20 has no hits.
UFO05994.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:36:30 Download gff for
UFO05994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8862-RA | 50..990 | 1..938 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:19 Download gff for
UFO05994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EndoG-RA | 73..1013 | 1..938 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:27 Download gff for
UFO05994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EndoG-RA | 73..1013 | 1..938 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:27 Download gff for
UFO05994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12177551..12178481 | 1..928 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:19 Download gff for
UFO05994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8065056..8065986 | 1..928 | 99 | | Minus |
