UFO05995.5prime Sequence
1103 bp (984 high quality bases) assembled on 2009-07-25
> UFO05995.5prime
CAGTCGACATGCCACAACCGAAGCCATACGAGAGGCCCGCGGACTTCATC
GATCCCGGCAAGCCGTCCAAGTGCAAATGGCATCTGGGTACAGCCGAGAA
GTCGCCCCACATCCATCGGGGCATCGCCCACCGCCAGCAGATTACGCCCA
ACATCCTCGAGGTGATCGGATGCACGCCACTGGTCAAGTTGAACAACATT
CCCGCCAGCGACGGCATCGAATGCGAGATGTATGCCAAGTGCGAGTTCCT
TAATCCGGGTGGATCAGTGAAGGACCGCATTGGGTACCGCATGGTGCAGG
ACGCCGAGGAGCAGGGCCTGCTCAAGCCAGGCTACACCATCATCGAACCA
ACGTCTGGAAACACGGGCATTGGACTGGCAATGGCCTGTGCCGTTAAGGG
ATACAAGTGCATTATCGTGATGCCGGAGAAGATGTCCAACGAGAAGGTGT
CCGCGCTGCGAACCCTCGGGGCCAAGATCATACGTACTCCAACGGAGGCA
GCCTACGATTCGCCGGAGGGACTGATCTACGTTGCTCAGCAGCTGCAGCG
GGAAACGCCCAACTCGATTGTCTTGGATCAGTATCGCAACGCTGGCAATC
CGCTGGCTCACTACGATGGCACTGCCGCCGAGATTCTGTGGCAGCTGGAC
AACAAGGTCGATATGATAGTGGTCTCGGCGGGAACGGCGGGAACTATCAG
TGGTATTGGGCGTAAGATCAAGGAGCAGGTTCCCAGTTGCCAGATAGTCG
GCGTGGATCCCTATGGCTCGATCCTTGCCCGCCCTGCTGAGCTCAACAAG
ACCGATGTGCAATTCTACGAGGTGGAGGGCATCGGCTACGACTTTCCGCC
CACCGTATTCGATGACACCGGTCGTGGATGTGTGGACGAAAATCGGCGAC
TCAGACTGTTTCCCCATGAGCAGACGCCTGAACGCGGAAGGAGGGTCTGT
TGTGCGGCGGGTTCAGTGGCTGAGCGATGCACGCTGCCCTCCAGCATGCC
CGCAAATGAAGAAAGGCCAGCGGGTGCGTGGTCATTCTGCCCGATGCATA
CGCACTACATGACAAGTTCTGTCGACAACTGGGATGGAGGCCGCCACCTT
CAG
UFO05995.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:08:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cbs-RC | 1788 | CG1753-RC | 92..1176 | 9..1091 | 5150 | 98.8 | Plus |
| Cbs-RB | 1990 | CG1753-RB | 294..1378 | 9..1091 | 5150 | 98.8 | Plus |
| Cbs-RA | 1911 | CG1753-RA | 215..1299 | 9..1091 | 5150 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:08:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21047557..21048369 | 232..1046 | 3835 | 99.1 | Plus |
| X | 23542271 | X | 21047190..21047412 | 9..231 | 1115 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:08:05 has no hits.
UFO05995.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:36:31 Download gff for
UFO05995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1753-RB | 287..1389 | 1..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:45 Download gff for
UFO05995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cbs-RA | 208..1310 | 1..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:58 Download gff for
UFO05995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cbs-RA | 208..1310 | 1..1103 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:58 Download gff for
UFO05995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21047181..21047412 | 1..231 | 98 | -> | Plus |
| X | 21047557..21048429 | 232..1103 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:45 Download gff for
UFO05995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20918208..20918439 | 1..231 | 98 | -> | Plus |
| arm_X | 20918584..20919456 | 232..1103 | 98 | | Plus |
