UFO06010.5prime Sequence
1083 bp (984 high quality bases) assembled on 2009-07-27
> UFO06010.5prime
CAGTCGACATGTCGCGATCCGCACAAGAAGCTGCGGCGCTGCTGCGGGGA
CTGCGGATCTTGTTGGAGGCGTGTGGGCGCGAGCATCTCGCCCACGGTCG
TCATCTGTGGAGCAATTCAAGCATTCGTGAGCTAATCGCCGAGAATGTGG
CGCACACACAGCAGCTGGTGAGAAGTTCCAGTCAAAATCCCACCGAGGAG
CTGAAAAAACTGCAGCAAACTGTAAAAGAAACGGGCGAAAGGGGCTACGT
GGTGGCCAAAGGTATTTGCTCGCTGCTGGAGACGAAAATCAAGATGTCCC
GCGAGGAATCGGCCATCTCTGAGCCTGCACAAGTCTCCTCAATTCGTAAA
TCCACACCCACGGCACAAAATCCAGCAAGTTGGGACGCCGCCAACTTGGA
TATATCATCCATAACGCTGCAGGAGTTCGAGGAGATACTCTCGCGCCGGA
ACAAAGATCGTAGTGTTAGCTTGCGCACCCCGGCAACCAAAAGCAACCAG
ACCATGCCCAAAAAAGAAACGTCAACCAATCCGGGCATCATTACCCAGGA
CACGGAGTATGTAAACAATGTGCTGCGGTTTGTGGCGGGCGCCAAGGTGG
AGGAGCAGCCACCAGATGCGCAGCCGAAGAAGAAGTCCGACCAGCCGGCC
ATTGAAGTGCCCGAACTGAGCAAGGTGGCCAAACAGCGCAAGGTTCCCTC
CTCCCGGATAGGCAGAATGGCCTCCTTTGGCGGCCTGTTCGCCGGCCTGG
GCCTGGGAACCCTCAACGAGCTGACCAAGGGTGCACTCGGCCTGCGCGGT
TCGACCAGCATGCGAGAGGCGTTGCTCAGTCCCGCCAATGCTGAACGCAT
CGTGACACGCTATGCAAGGTGAGAGGAGCTGCCCTGAAGATCGGACAATC
CTGAGCATACAGATTCCAGCGTTGTGTCGCCGCACTGCCCACGGCGTTGA
GCGGGTGCGTCAGCGCGGACTATATGCCGGATTGGCAAGTCGAACCCGTG
ATGACACCGATTGGTGCCGATTGGCGACGGTCTCAGAAGTTCAGGACAAT
CCTTTGCGCTGCTCAATGACAAGTTGCATCGGC
UFO06010.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32649-RA | 2280 | CG32649-RA | 160..1224 | 9..1058 | 4800 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12899953..12900955 | 1004..9 | 4595 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:07:51 has no hits.
UFO06010.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:36:46 Download gff for
UFO06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 117..1166 | 1..1041 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:16 Download gff for
UFO06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 155..1204 | 1..1041 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:36 Download gff for
UFO06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 155..1204 | 1..1041 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:36 Download gff for
UFO06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12899911..12900959 | 1..1041 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:16 Download gff for
UFO06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12793944..12794992 | 1..1041 | 97 | | Minus |
