UFO06026.5prime Sequence
1137 bp (1031 high quality bases) assembled on 2009-07-27
> UFO06026.5prime
CAGTCGACATGTCGCGAATTTCGAAGCGCGTCTATGAGGCGAAGTCCACT
TACCCGGATCGCACCAAGTCCGAGGAGAAATCCTTCACGGAAGTGAGTGT
GCCGATCAAGAAGCTGGATACGGCGCTGCTCCTCCTGAGTTCAAAGGAGG
AGTGTGTCCTGCTGACCATTTTCAGCCACATAACGGACTTTGCCCGCCGC
CAGGATGTGAATGTGCTGGAACTGAAGGCCCATCGCTTGTTGGAGCTGTT
GCTGGAGAAGGATTTGTTCATCGCGTCGGAGAACACGATGATCCGCCGCT
TTGCTCTGTACTTGCTCACTGCTCTGCTGGACAACACGGACATGTCCACC
TATGAGCCAGAACAAGCGGATCAGATCCTGGAGCTGGCGTGCAGATTCTA
CATGAAAGAGGTGGACGACTTCTGCATCGAGTACTTGACGTATATACTCA
ATGTGTGCCTGAAGGATCCCCAGATGGCACATGGCATTGTCGAGGCCACC
GAATTCCTGGAGAAATTTAAGTTGGTGTTCATAAGTTCGGAGAATCCGGA
CACCGTGTTCAACTCGATTGAGGCACTGCATAGGATGCTACTGGTCCAGA
GTGCAGATCAAATGCTGGATTTCACAACACAGCCGGATTTTCCGGTAGAT
CGTATTATCTGTGAGGTTACCAACGAGTTCCAGGAGATCCGCAAGGCGGC
CCTTAAAACATTGAAGACTCTGCTGGCGGACACTGGCGACGATAGCGTCT
TCGAGGCACTGCATCGTTGCTACTTCGTGCTGGAGCAGTTGGTCAAGGTG
TTTTGCGAGAGTCCACAAGGGCCGGAGGCTGCCGATGTCATCGAGGTTCT
GGCCACAGCTCTGCGATCCGAGAAAGATGACCAAGCTGTTCTTCGAGCAG
AACCTCTTCGACCAGGTTGTCGAGCAGTGCGCAATCACATGGACCTCATG
CCGCTGGAGAATGCGCTGCACCATCATAATCGATTTTCGCTGAGACGGCT
CAGTACGGAGCAGTTCCTACCAAGGATGCACAAGACCGAAATCCAGACCT
GTTTCCTCACCTGTTTTATGCAGAACAGCCGGCTCGGCTGCCTACGTCAT
CAAGGACTCATGCATGTCCCACCATTCGGGAGCCCTG
UFO06026.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13326-RA | 2778 | CG13326-RA | 82..1214 | 7..1137 | 5270 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13131277..13132374 | 1105..7 | 5005 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:43:18 has no hits.
UFO06026.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:44 Download gff for
UFO06026.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13326-RA | 76..1202 | 1..1125 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:30 Download gff for
UFO06026.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13326-RA | 76..1202 | 1..1125 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:55 Download gff for
UFO06026.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13326-RA | 76..1202 | 1..1125 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:55 Download gff for
UFO06026.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13131254..13132377 | 1..1125 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:30 Download gff for
UFO06026.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9018759..9019882 | 1..1125 | 98 | | Minus |
