UFO06035.5prime Sequence
1055 bp (998 high quality bases) assembled on 2009-07-27
> UFO06035.5prime
CAGTCGACATGGACGACAACGAGGATGAGCTGGAGGAGCACCAGGAGCTG
GTCAGCGACGGCAGTGTCGAGGAGGAGGAGGAGGTGGAGCCCGATCTGGG
ACCAGTGGACAGTTGGGAGTCCTTTAATGACCGCATCGATGGCCTGATCT
TTAACGAGCGATGCGACAAGTCGGTGAAGAAGTTGGACGAACGCCGGCTG
GCGATACTCAACCGGGTGCGTCAGCAGTTCCGCGAGGCCCCGAAAGGCGT
CGCCGAACGTTGCCAGGCCCAGAAGTCGCCGATTGATCAACGGCTGGAGT
TGTCCAGTGAGCGATTGAACGAACTGGTGCGCTTTGGCAAAGAACTAGTG
ACCAATGTCCGGGTGGCCAACGAGCGAAGGGAGCTGAATCGCCGACTCTT
CGAGGGTGCGCAGAAGAATCAGATGCATGTGAAGCTGCAACGCGAAAGCG
TTGAGACAATGGCCCGTTTCGAGAACATTAAGGCGCGCTGGACGGAGCTG
GAGGAGACCAATGAGCCGATGCTGTTGTGGGACCAAATCGAAGAGCAAAA
GAAACGCATTGCCGAGATTATGGCACGCAAGGATGAGATGATATCTGCCT
GCCAAGCGGAGGTGGACCGCATGAATGCCAAGTACGAGTTCGATCGCGAG
CGGCAGGCCCAGGATCTTTGTTGTCTGGTGGAGCGCGTTGATCACCAGGT
GGAGACGCTTAAGGAGGCCTACAAGGAGCACATCCAAATGCTGCGGCAAA
CCATCGAGGAGGAGCGTCAAATCTTCGCCGATAATGCGGTGGAGAAGTGG
CGCACCTTCTTCGATGCGATGAATGCCAACTTTGACGAGAAGGCCAATTT
GGTAAGGGCACGCGAGCAATTCTATGCTCGCCAAACCCAGCAGATCACGA
GTCCCAGGAGGAGCTGACCAGAGCACTCGCATTCGGCTGGAGAGGAGTGG
CGAGGAGGCTCGAGCTGGAGCTACGTCGCACGCCGCGACATGTGCTGATG
ACTCGAGAGCTGACTACACTATTCAGTTCTCGAACGCCACGAGGAACTGT
ACTAG
UFO06035.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10958-RA | 2683 | CG10958-RA | 228..1273 | 9..1045 | 4820 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8132512..8133487 | 9..983 | 4660 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:26:46 has no hits.
UFO06035.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:45 Download gff for
UFO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10958-RA | 107..1126 | 9..1022 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:15 Download gff for
UFO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10958-RA | 228..1247 | 9..1022 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:27 Download gff for
UFO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10958-RA | 228..1247 | 9..1022 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:27 Download gff for
UFO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8132512..8133531 | 9..1022 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:15 Download gff for
UFO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8026545..8027564 | 9..1022 | 98 | | Plus |
