UFO06036.5prime Sequence
1041 bp (935 high quality bases) assembled on 2009-07-27
> UFO06036.5prime
CAGTCGACATGTCGCGCAGCGTGCGGGCGGAGACGCGCAGCCGGGCGAAG
GATGACATCAAGCGGGTGATGCAGGCGGTGGACAAGGTGCGCCACTGGGA
GAAGAAGTGGGTGACCATCAGCGACACCACCATGAAAATCTACAAATGGG
TGCCCATCGCCTCCGCCAGTGAGAAGAAGGCCAAGCTGGAGTCCTCGCCG
GGATCGGCTGCTGTCCGGAGACCGCCCCCCGGCTCGGGCGTTACGCCGGT
CGGCGGCAGCAAGAGCGATAAGGAGAACTCTCAGAAGGGCACGCCCACGC
CGCCGCAGATCACGCCCAGCTACCAGGGACTAACCGCCGAGGACTCTAAC
ACCTGTTTCTCCGTCGTGTCCGACAGCCAGGGCGCCGACTTCGTGTCGAG
TATGCCCTTCTCTGAGGACTCGAACTCGCAGGGCAGCGATGGACCCGTGA
AGCGATTGAAGACGAGCGACGCAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGT
GAAACGGGGGCGACGAGTTGTCCATATTGACCACGTTTAATCAAACTGAT
GAAACTCACCCAGTGATTGGCTGAGACGAATAACATATGCTCACTAATCC
TGTAGGAAATAGTCAGATTGTCACGTACACGCACATCCTGCATATATGTG
TAGCAACTGCCGGAAATCGTCCTGCATTCACTCAGAGCATG
UFO06036.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BCL7-like-RA | 1664 | CG17252-RA | 284..748 | 6..470 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9356917..9357267 | 6..356 | 1755 | 100 | Plus |
| X | 23542271 | X | 9357563..9357678 | 355..470 | 580 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:25 has no hits.
UFO06036.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:45 Download gff for
UFO06036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BCL7-like-RA | 268..740 | 1..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:30 Download gff for
UFO06036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BCL7-like-RA | 280..752 | 1..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:17 Download gff for
UFO06036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BCL7-like-RA | 280..752 | 1..475 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:17 Download gff for
UFO06036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9356913..9357265 | 1..354 | 99 | -> | Plus |
| X | 9357563..9357678 | 355..470 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:30 Download gff for
UFO06036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9251596..9251711 | 355..470 | 100 | == | Plus |
| arm_X | 9250946..9251298 | 1..354 | 99 | -> | Plus |
