UFO06037.5prime Sequence
1080 bp (966 high quality bases) assembled on 2009-07-27
> UFO06037.5prime
CAGTCGACATGGCCCCACCCACGGTCCTGGTCACCGGAGGAGCCGGCTAC
ATTGGCTCCCACACGGTTCTGGAGATGCTCAATGCGGGCTACAACGTCAT
CTGCGTGGACAACCTGTGCAACGCCTACAGCAGCGGGGCCAAACTGCCGG
AGGCCCTCAGCCGGGTGCAGGAAATCACCGGCAAGAAGGTCAACTTCTAT
AGAGTGGACATCACGGACAGGGAGCAGGTGCGCTCCGTCTTCCAGGAGCA
CAAAATCGACATGGTGGCCCACTTTGCCGCCCTGAAGGCCGTGGGTGAGT
CCTGCCGCATACCTTTGCAGTACTACCACAACAACATGACCGGCACCAAT
GTCCTGCTGGAGGCGATGGCCGACAACAATGTCTTCAAGTTCGTGTACAG
CTCCAGCGCCACCGTATACGGTGAGCCAAAGTTCCTGCCCGTGACCGAGG
AGCATCCCACGGGCAACTGTACATCGCCCTACGGCAAGACTAAATATTTC
ACCGAGGAGATTCTCAAGGATCTGTGCAAGTCTGACAAGCGTTGGGCAGT
GGTTTCGCTGCGGTACTTCAACCCGGTGGGTGCCCACATCAGTGGTCGGA
TTGGCGAGGATCCGAACGGCGAGCCCAACAACCTGATGCCCTACATCGCA
CAGGTGGCCGTGGGTCGACGTCCCAGCCTGAGTGTCTACGGCAGCGACTT
TCCCACGCACGACGGCACCGGCGTGCGCGATTACATCCACATCGTGGACC
TGGCCGAGGGACACGTAAAGGCGTTGGACAAGCTGCGCAACATCGCGGAG
ACGGGCTTTTTCGCCTACAATTTGGGCACCGGCGTGGGCTACTCGGTGCT
GGACATGGTGAAGGCGTTTGAGACGCCTCCGGGCAAGAAGTCAACTACAC
TCTGGTGGACCGACGGTCCGGAGATGTGGCACTTGCTATGCGACGCACGT
TGGCGGATAGAGCTGGGCTGAGCGAGCGTGCATCGACAGATGTGCGAGGA
CCCGTGGCGCTGCAGAGCAGACCCAAACCGGTATGCTACAGCAGCTTTCT
AGAACATTCGTTGGCGCGCGGCCAGGTATG
UFO06037.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gale-RB | 1538 | CG12030-RB | 280..1322 | 9..1036 | 4770 | 98.1 | Plus |
Gale-RA | 1757 | CG12030-RA | 499..1541 | 9..1036 | 4770 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 650582..650988 | 538..942 | 1860 | 98.3 | Plus |
3L | 28110227 | 3L | 650231..650523 | 247..539 | 1465 | 100 | Plus |
3L | 28110227 | 3L | 649180..649419 | 9..248 | 1200 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:31:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 5077..5115 | 415..377 | 123 | 79.5 | Minus |
UFO06037.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:35 Download gff for
UFO06037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12030-RA | 533..1579 | 1..1036 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:02 Download gff for
UFO06037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gale-RA | 495..1541 | 1..1036 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:05 Download gff for
UFO06037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gale-RA | 495..1541 | 1..1036 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:05 Download gff for
UFO06037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 649180..649419 | 9..248 | 100 | -> | Plus |
3L | 650233..650523 | 249..539 | 100 | -> | Plus |
3L | 650584..651095 | 540..1036 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:02 Download gff for
UFO06037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 649180..649419 | 9..248 | 100 | -> | Plus |
arm_3L | 650233..650523 | 249..539 | 100 | -> | Plus |
arm_3L | 650584..651095 | 540..1036 | 96 | | Plus |