UFO06047.5prime Sequence
1128 bp (1010 high quality bases) assembled on 2009-07-27
> UFO06047.5prime
CAGTCGACATGTTCGGCACCGTAAATAACTATTTATCCGGCGTTTTGCAC
GCCGCCCAGGATTTAGATGGCGAGTCCTTGGCCACGTATCTCTCCTTACG
AGACGTGCACGTTCAGAACCACAATTTGTACATTGCCCAGCCGGAAAAGT
TGGTGGATCGATTCCTGAAACCGCCACTGGACGAAGTTGTGTCCGCCCAC
CTGAAGGTGCTGTATCACCTGGCACAGGAGCCTCCTGGTTACATGGAAGC
CTACACCCAACAGTCGGCAGCCTGCGGAGCCGTTGTGAGGCTTTTGCAGC
AGCTGAAGGACGAGAATTGGTGCCTGCCACTAATGTACCGCGTGTGCCTG
GATCTAAGGTACTTGGCGCAGGCCTGCGAGAAGCATTGTCAAGGATTCAC
ACCTGGCCACGTATTGGAGAAGGCTGCCGACTGCATAATGGCCTGTTTCC
GCGTTTGTGCCGCTGATGGACGAGCTTCAGAGGAGGACACCAAGCGTCTG
GGCATGATGAACCTCGTAAACCAGCTATTCAAGATTTATTTTCGAATCAA
CAAGTTGCATCTGTGCAAGCCCCTTATCCGTGCCATCGATAATTGCATCT
TCAAGGATTCTTTTCCGCTGCCGGAGCAAATTACCTACAAGTATTTTGTA
GGTAGACGGGCTATGTTCGACTCCAACTACCAGGCAGCCGTACAGTATCT
GTCGTATGCCTTTAGCAACTGCCCGGATCGGTTTGCCAGCAACAAGAGGC
TCATCCTCATCTATTTGGTGCCAGTGAAGATGCTGCTGGGATATCTGCCC
AGCAAATCCTTACTGCAGCGCTACGATCTCCTGCTGTTTCTCGATCTGGC
TATGGCCATGAAGGCTGGCAATGTGAATCGCTTTGATGAGATTGTCAGGA
CCAGGAGCTGGTGCTGATCAGGAGTGGTATCTATCTGCTGGTGGAGAGCT
CAAGTTCCTCGTGTTATCGCAACCTGTTCAAGAAGGTGTTCGTCATCCGG
AAATCGCATCAGTGGACATGGGTGACCTCCTCCTCCGCCCTTGCAATTTC
GTGCTACCGATGTTTTCTTCTGGACGAAAACGCACTGCATCCGTGCCAAT
CTCATTTACATGAAGAACTAAGGTACAA
UFO06047.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PCID2-RA | 1275 | CG7351-RA | 40..1140 | 9..1109 | 5135 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11626480..11627505 | 9..1032 | 4920 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:38:30 has no hits.
UFO06047.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:37 Download gff for
UFO06047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7351-RA | 35..1060 | 1..1026 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:24 Download gff for
UFO06047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PCID2-RA | 34..1059 | 1..1026 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:02 Download gff for
UFO06047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PCID2-RA | 34..1059 | 1..1026 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:02 Download gff for
UFO06047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11626474..11627499 | 1..1026 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:24 Download gff for
UFO06047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11619574..11620599 | 1..1026 | 99 | == | Plus |
