Clone UFO06056 Report

Search the DGRC for UFO06056

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:60
Well:56
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG1440-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO06056.5prime Sequence

523 bp (61 high quality bases) assembled on 2009-07-27

> UFO06056.5prime
CAATCCACATGTCTGACAACATCTACGGATCCGGAGGAGGTGGAAGCGGA
GGCGGTGGCGCCGGTAACAATAACAGTGCCAATAGTGGTAATAACTCCAC
GCTCCGGTTCGCTGAGACCAGTGTGATCACCAATCAATTGTTGGAAAAAT
GGCGGAAAAACTTCTACAGCAAACCAAATAATCTGCTGGTTTTTAACGTC
TGCTCACGCGTTGATCCGTTCGATGTGTGCCTGTCCAGGAAGGCACTGGA
AACCACCAATCATGTGTTCAACTACAAGGTGGAAACGGAGGGCAAGCCGG
TGACCAATCAAAGGAGCTCCGGCCGCTGCTGGCTGTTTGCGGCCCTCAAC
TGCATCCACCTGCCATTCTTGAAGAACTACAATCTGGACTAGTTCGAATT
CTCGCAGGCCTTCCTCTTCTACTGGGACAAGATCTATCGTTGCAACTACT
TTCTCAACGATGTTGGGAAGACGGCACAGCGCGGCTAGAAGGTTGATGGT
CGTCTGGTGTCGTTCCTGCTACT

UFO06056.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG1440-RA 1877 CG1440-RA 235..749 9..523 2200 95.1 Plus
CG1440-RB 1969 CG1440-RB 330..841 12..523 2185 95.1 Plus
CG1440-RD 2394 CG1440-RD 428..938 13..523 2180 95.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8439109..8439619 13..523 2180 95.1 Plus
Blast to na_te.dros performed on 2014-11-28 22:42:11 has no hits.

UFO06056.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:28 Download gff for UFO06056.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1440-RA 204..726 1..523 94   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:08 Download gff for UFO06056.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1440-RA 204..726 1..523 94   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:22 Download gff for UFO06056.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1440-RA 227..749 1..523 94   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:22 Download gff for UFO06056.5prime
Subject Subject Range Query Range Percent Splice Strand
X 8439106..8439619 8..523 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:08 Download gff for UFO06056.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8333139..8333652 8..523 94   Plus