UFO06057.5prime Sequence
1107 bp (995 high quality bases) assembled on 2009-07-27
> UFO06057.5prime
CAGTCGACATGGCCAACGCTGTGGTGGTGTTGGACAACGGAGCGCATACG
GCGAAAGTGGGCCTGGCCAATCAGGATGAGCCCCATGTGGTGCCCAACTG
CATCATGAAAGCAAAGAGCGAGCGGCGACGCGCTTTTGTGGGAAATCAGA
TAGATGAATGCCGGGACACATCGGCGCTCTATTACATTCTGGCGTTCCAG
CGCGGCTACCTGCTCAACTGGCACACACAGAAAACGGTGTGGGATTACAT
ATTCAGCAAGGACGGCATTGGTTGTTCGCTGGAGAACCGCAATATTGTCA
TCACTGAGCCGCAGATGAACTTCCAGAGCATCCAGGAGGCAACGCTGGAG
ATTCTGTTTGAGGAGTACAAGGTTGATGGGGTGTACAAGACCACTGCTGC
CGATCTGGCTGCCTTTAACTATGTGGCTGACAGCGAGGAGCGGACTACAA
TGGAATCGCTTAACTGCATCATCATCGATGTAGGCTACAGTTTCACCCAC
GTTGTTCCTTTTGTGCTGGGACGGCGCGTTCTCCAAGGCATACGACGCAT
CGACATGGGCGGGAAGGCGCTGACCAACCAGCTAAAGGAGCTAATCTCTT
ATCGCCACCTAAACGTCATGGACGAGAGTCATGTAGTTAACCAGATCAAG
GAAGATGTCTGCTTTGTGGCGGAGGACTTCAAGCAGGCGATGCAGGTGCA
TTATTCGGAGGAGAAGCGACGCGAAGTCACAGTTGATTATGTCCTTCCAG
ACTTCACCACCGTCAAACGGGGCTATGTTCGTGTTCCCGGAAAGCCGCGC
GAGGATGAGGAGCAACAGCAAATGGTGTCGCTGTGCAATGAACGTTTCAC
CGTGCCCGAGCTGCTCTTCAATCCCTCGGACATTGGTGTGCAACAGTGGG
CATTCCGGAGCGGTGGCCGATTGTCTGAAGGCTTGCCCTGGGAAGCGCAC
GCGAACTCTGCTCAACATCCTTATTGTGGGGCGGCAGTGCCCAGTTTCCG
GATTTCTGCCGCGGCCTAAAGCGCGATTTACTGCCCTGGTGCCCGACGAT
CTTGAGGTCACTCATCTGTCCGAAGATCGGGGCGTACGCTGTACGCGCAA
GAAGGTG
UFO06057.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:23:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Arp6-RA | 1347 | CG11678-RA | 88..1157 | 9..1071 | 5085 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15735964..15737033 | 1071..9 | 4830 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:23:11 has no hits.
UFO06057.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:27 Download gff for
UFO06057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Actr13E-RA | 41..1134 | 2..1089 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:09 Download gff for
UFO06057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arp6-RA | 85..1178 | 2..1089 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:59:45 Download gff for
UFO06057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arp6-RA | 85..1178 | 2..1089 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:59:45 Download gff for
UFO06057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15735943..15737036 | 2..1089 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:09 Download gff for
UFO06057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15629976..15631069 | 2..1089 | 98 | | Minus |
