UFO06067.5prime Sequence
1118 bp (1017 high quality bases) assembled on 2009-07-27
> UFO06067.5prime
CAGTCGACATGAAAGCGGTTCTCTGCGCGATTTTTGTAACTTTGCTGGCC
GCTATTGGCCAGGGATTGCCCACTCAGTTGGAGGATGAGAATCATGGATC
CTTTGCCGGCCAAGTTTCCCAGCTGATTGCTCTGCAGCTGCTGAAGTTCA
ACAAGGACATCGATGCCAATCAGGTGCATTCTCCATTGGGAGTAGCTTCT
ATTCTGGCCATGCTGGCGGAGGCTTCCGAAGGCGATACCTACTCGGAGTT
TGAGCAAGTCTTCGGTTACCCCAAGGATCGCACCAAGTTGAGGGATGCCT
ACAAGAGGATCCTGGGAAGCTACCAGAACAGAGATGCTGCCGTGGCCCTG
CCCTCCTTCCAAACCTGGTTGTACATCTACCGGAATAACAGTGCCCGCGA
GGAGTTCAAGGATCTGCTCGAGAAACACTACTATGTGGATGTGAAGGATA
TCAGTCGGCAGGAGTACGACTGGAATGAGCCCAACACCTCGCTGCAACTT
TCAGAGGAAAAGGACAACACGGATTCCACAGAGGGAAGCACCGAACAAAG
CAACAGCAAGGACGTCATAGGATTCGAGACCCTAAAGAGAATTAAGCTGG
ATGACGAGGACATCCCTGCCATTCCATCCGATGGCTATGGCCAGGAAATC
ATCGACAAAGAGGCCTCCAAGTTCGATCGCGACGTGGACGACAAGCAATA
TGTGGAAAAACCAGTTGCCCAGGCTGAGGCCGAGCTACTGCAGAAAGAAC
AGAAGCAGCAGGCCACCACAGAATCTGAATTGGAATCCCAGCCCGAGGAA
ACCACCACTCTTTCTGTGGAAAAACAGGAAAAACCAGACATGGCAGCCGA
GGAAAATCCAGCAGAAAAGCAGCAGACAAGCGCAGCGACCAGGAGGAGAG
CCAGATCAAGACCTCGAGGAGACGAGACTGTGCAGAGGAGGAGAAGCTGG
CCAGATCATGGCAGCTCCCGCTTTGACCGCCGGTGAACCCGAGAGTGCGT
CTGCCCCTCAGAAGTTGGAGAATGCGTGAGACGGCGCAGGATGGCGCTGA
TGAAATCATGCCTCGCCTCTGGAGTCCCACCTACCTTCTGTCAGTCGTCA
TGGCCACGAAGTTGTTCA
UFO06067.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn100A-RA | 2038 | CG1342-RA | 21..1141 | 8..1113 | 5155 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30690662..30691762 | 8..1097 | 4845 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:54:14 has no hits.
UFO06067.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:23 Download gff for
UFO06067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1342-RA | 13..1144 | 1..1117 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:18:05 Download gff for
UFO06067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn100A-RA | 15..1146 | 1..1117 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:27 Download gff for
UFO06067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn100A-RA | 15..1146 | 1..1117 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:27 Download gff for
UFO06067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30690656..30691766 | 1..1102 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:18:05 Download gff for
UFO06067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26516378..26517488 | 1..1102 | 97 | | Plus |
