UFO06077.5prime Sequence
1130 bp (1036 high quality bases) assembled on 2009-07-27
> UFO06077.5prime
CAGTCGACATGAATTTACATGTGTGCGCCTTAGCGCTGCTGCTGTTCGGC
AGCATCGCCACTGTCCGCGGAAGAGCCGTGGACCTGGTAGACGATAGCAA
CGACGTGGATAACTCCATCGAGGCGGAGGAGGAGAAGCCACGCAACCGAG
CCTTCGAAGCCGACTGGCTCAAGTTCACCAAGACGCCGCCGACGAAGCTG
CAGCAGGCCGATGGAGCCACCATCGAGATCGTTTGCGAGATGATGGGCTC
CCAAGTGCCCAGCATCCAGTGGGTGGTGGGTCACCTGCCCCGCTCGGAGC
TCGATGATCTGGACTCCAACCAGGTTGCCGAAGAGGCGCCCAGTGCCATT
GTGCGCGTCCGATCGTCGCATATCATCGACCACGTGCTGAGCGAGGCCCG
CACCTACACGTGTGTGGGACGCACTGGCTCCAAGACCATCTATGCCAGCA
CTGTGGTGCATCCTCCTCGCTCCTCTCGTCTGACGCCGGAGAAGACCTAC
CCGGGTGCCCAGAAACCGCGAATCATCTACACCGAGAAGACGCATCTGGA
CCTCATGGGCTCCAACATTCAGCTGCCCTGCCGCGTGCACGCCCGTCCCC
GCGCCGAGATCACCTGGTTGAATAACGAGAACAAGGAGATCGTCCAAGGA
CATCGCCACAGGGTGCTGGCCAACGGCGATCTTCTGATCTCCGAGATCAA
GTGGGAGGATATGGGCAACTACAAGTGCATAGCCCGCAACGTCGTCGGAA
AGGATACCGCCGATACCTTCGTGTATCCCGTACTTAATGAGGAAGACGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCG
AGCGTCTGACAAATCCAGATGGAGTTCTGAGTCATTACTGATCTATCACA
GAGTCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGG
CAGTACTGTTGTATTCATTAGCATTCTGCCGACCTGCAGCATCCGACGCA
TGATGAACTGAATGCCAACGGATCAGACCT
UFO06077.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:57:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-RD | 2355 | CG15009-RD | 733..1521 | 9..797 | 3945 | 100 | Plus |
| ImpL2-RC | 989 | CG15009-RC | 71..859 | 9..797 | 3945 | 100 | Plus |
| ImpL2-RB | 1651 | CG15009-RB | 733..1521 | 9..797 | 3945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:57:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4224927..4225703 | 785..9 | 3885 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:57:01 has no hits.
UFO06077.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:14 Download gff for
UFO06077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RC | 62..870 | 1..809 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:43 Download gff for
UFO06077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RB | 727..1532 | 2..809 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:39 Download gff for
UFO06077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RB | 727..1532 | 2..809 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:39 Download gff for
UFO06077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4224922..4225709 | 1..791 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:43 Download gff for
UFO06077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4224922..4225709 | 1..791 | 99 | | Minus |
