UFO06080.5prime Sequence
1109 bp (1011 high quality bases) assembled on 2009-07-27
> UFO06080.5prime
CAGTCGACATGGACATCGACTGGCAAAACGGCCTCACCGAGCTGAAGGAT
CGGGGCCAGTACCTGCTCCACTCGGAGAAGTGGGCCGACTGCCGCTTTCT
GGTGGGTTCTTCGCCCACCCAGCGGCTCATTGCCGGCCACAAGCTGCTAC
TGGCCATGGCTTCGCCGGTGTTCGAGCGAATGTTCTATGGCAACCTGCCC
GATAAGACGGACCCCATCGTCATTCCGGACGTGCAGCCGGAGGCGTTCGA
GGCGATGCTGGAGTACATCTACACGGACCGCATCACCATTGGGTCCTTCG
ACAAGGCCTGCGAGCTGTGCTACGTGGCCAAGAAGTACATGCTGCCCCAC
GTGGTCACGCGCTGCACCCATTTCCTTTGGGCTGATCTTAGTCCGAAAAA
CGCGTGCCGGGCGTACGAGTTTGCCAAGCTGTTCGATGAGCCGCGCCTCA
TGCAAAGCAGCATGGATCTGATCGCGGCCAACACGCGCGAGGTTCTGTCC
GATCCCAGCTTCCTGGACATCGAGGTCTCCACCCTGATGGCCATTCTTGA
CCAGAATCGCCTGAACATCGACTCCGAGCTGGATTTGTTCAACTGCCTGC
TGAAGTTTGCCAGTGAGCGGGGCATCCTGAACGAGTCCGGCCAGGAAGAG
ACTGCTAGCGGAGGTCAGGTGCTGACCAAGGAATCGCCCGACAATGCTGC
CGGCCATGTGCTGGTCGAAGAGATCAAGATGGAGCCCGATGTGGCGGCCA
TGGTGCAGCACATGCACCAGGACGACGAGGCTGACAGCTTCGAAACGGAC
GCTGGGATGGCTTCCACTTCCTCTGCGGCTGCCGCGGCTGCAGCTGCGCC
CACGGCTGCCTCCCCGCCGCTGGACGTGGCTTCCGGCTCCGACGACCTGT
ATCATCGATAGCGACGCTTCGCCGATGCCGCCGCCACATGATACATCATG
ACGCCCAGCGCACCATTCTCGATGGCGCCATGCTCAGCAGGCGTCAAAAA
GATCGCTTTCTCCCCATGACGCCCCCAGCAGTCGCGAGGACGCCGATCAG
CCTGCCTGCGCCGCCGAGCCCTTCTCATCCTGAATAAATCTCTCCAGTCC
TCGCTCACG
UFO06080.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17068-RA | 2785 | CG17068-RA | 141..1173 | 9..1032 | 4875 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20249929..20250953 | 1023..9 | 4665 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:06:03 has no hits.
UFO06080.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:12 Download gff for
UFO06080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17068-RA | 484..1531 | 1..1039 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:05 Download gff for
UFO06080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17068-RA | 135..1182 | 1..1039 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:49:56 Download gff for
UFO06080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17068-RA | 135..1182 | 1..1039 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:49:56 Download gff for
UFO06080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20249912..20250959 | 1..1039 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:05 Download gff for
UFO06080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20120986..20122033 | 1..1039 | 98 | | Minus |
