UFO06089.5prime Sequence
1106 bp (1007 high quality bases) assembled on 2009-07-27
> UFO06089.5prime
CAGTCGACATGGCACATTCTATGCTGAAACTGGGGATGATGTGTGGAATA
CTCCACCTGCTGACCTTTGGAGTCATTGCCGAGGATCAGCTGAAAAACAA
CACAATAGTGGTACATACTCCTCTCCAGAACTACGATCAACCCAATCTCC
AGGACTACGAGGAATGCCAGGTGAACAGGGACAATTGCATCAATGTTTGC
GCTGGCAAACAGTCGTGCGAGGACGAGTGTCCTGTGTGCCCGGACCTGTA
CGTCAAGCCCCTGATGGTTCAGGGCATTAACGATACGAATATAGTGGCAC
CACCCCAGGTACCTATTAATACGACCAACATTATTCGGCTGACCAACGAT
ATCAACAATATAATCGAACATCAAATCCAAAATCGCAATGAGGTCAATGT
CCAGGTGAATCAGAATGTCTCGAAGGTGGGAGGACGTTTTGGACTGGGCT
ACACTGACAAGGGATCGTGCTGTTATGTGGTGCGTTTGGATCGCGAGTGT
AAGAATGAAGATGGACGCGACTGCAGAGAAAGAAGCCGTCAGCGGATCTG
TGGCGAAAAGTGTCAGGCCAGAGTGATGTTGGCCAAAATAGTGGTGCAGT
GTGAAGCCGAGGACTCCGACAGGTGTCACGAAACCATCGAATATGTGCCA
CGGAGGAGGAGAACCCTCCAGCGGAGGACACCCAAGGCTACACGGTGTCA
TTACACTGGCAACAGTTGGCCCTACTTCAATTGCGGACAGAATCCAGGCC
AAAATAGTGATTTTGCCCAGCCGACGAGGCCTAAGACCTCTATCTGCGAG
CACTGCCTCAATTATCCCTACGGATACATTCTGCAAAATGGTCTGCCCGC
CCAGTGTGCCGGTTGTTTCCAGGGATACGGAGCTCCCTCATGTATAATCC
TCCTTGGATGTACATCCATATTATGTGGCATATCCAGCCTTTAACATATA
CCGGCCATACAGAACAATATATGGCACAGCGTGACACCAGTGTAGATAAA
ACCATTGCAGATGATGATGACGATGATGGACTCTATGTGACGACATCGAA
ATGCCTAGACGCGAATACAAAGCTCGCGAAACAGCGGTCACTGAACATCT
TGGTCG
UFO06089.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3987-RA | 1483 | CG3987-RA | 90..1200 | 9..1106 | 5150 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15140336..15141386 | 23..1063 | 4810 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:35:42 has no hits.
UFO06089.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:27:50 Download gff for
UFO06089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3987-RA | 54..1173 | 1..1106 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:32:36 Download gff for
UFO06089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3987-RA | 81..1200 | 1..1106 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:11 Download gff for
UFO06089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3987-RA | 81..1200 | 1..1106 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:11 Download gff for
UFO06089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15140336..15141432 | 23..1106 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:32:36 Download gff for
UFO06089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10966058..10967154 | 23..1106 | 98 | | Plus |
